C30526 1477 1478 DML_lineage C30526 WUBlastX DNA_TcMar-Tc2 1439 2503 822 - . . C31762 6876 6877 DML_lineage C31762 WUBlastX LINE_L1-Tx1 6767 7456 316 - . . C34218 3108 3109 DML_lineage C34218 TRF Tandem_Repeat 3083 3154 62 + . . scaffold1054 34942 34943 DML_lineage scaffold1054 WUBlastX LINE_L1-Tx1 34443 36254 600 + . . scaffold1123 164524 164525 DML_lineage scaffold1123 WUBlastX DNA_TcMar-Marin 164429 164998 165 + . . scaffold1149 586504 586505 DML_lineage scaffold1149 WUBlastX RC_Helitron 585612 588923 1878 - . . scaffold1227 211125 211126 DML_lineage scaffold1227 WUBlastX DNA_Kolobok-Hyd 210664 211233 65 + . . scaffold123 141296 141297 DML_lineage scaffold123 WUBlastX RC_Helitron 141292 142239 20 + . . scaffold123 141296 141297 DML_lineage scaffold123 WUBlastX RC_Helitron 141259 141879 66 + . . scaffold123 141296 141297 DML_lineage scaffold123 WUBlastX RC_Helitron 141241 142008 49 + . . scaffold1244 196344 196345 DML_lineage scaffold1244 WUBlastX LINE_L1-Tx1 196026 196721 299 - . . scaffold1352 334374 334375 DML_lineage scaffold1352 WUBlastX LINE_L1 333934 334632 278 - . . scaffold1352 334374 334375 DML_lineage scaffold1352 WUBlastX LINE_L1-Tx1 334045 334632 347 - . . scaffold1354 110369 110370 DML_lineage scaffold1354 TRF Tandem_Repeat 110273 110605 386 + . . scaffold142 982300 982301 DML_lineage scaffold142 WUBlastX DNA_MuDR 980749 982617 440 + . . scaffold1462 3410 3411 DML_lineage scaffold1462 TRF Tandem_Repeat 3066 3797 580 + . . scaffold1462 3410 3411 DML_lineage scaffold1462 TRF Tandem_Repeat 3061 3645 1026 + . . scaffold1476 116084 116085 DML_lineage scaffold1476 TRF Tandem_Repeat 115805 116117 339 + . . scaffold1489 64924 64925 DML_lineage scaffold1489 WUBlastX RC_Helitron 64458 70424 2978 - . . scaffold1489 70081 70082 DML_lineage scaffold1489 WUBlastX DNA_Helitron 67890 71072 1724 - . . scaffold1489 70081 70082 DML_lineage scaffold1489 WUBlastX RC_Helitron 69762 71834 304 - . . scaffold1489 70081 70082 DML_lineage scaffold1489 WUBlastX RC_Helitron 64458 70424 2978 - . . scaffold1489 70081 70082 DML_lineage scaffold1489 WUBlastX RC_Helitron 65145 70205 3204 - . . scaffold1489 70091 70092 DML_lineage scaffold1489 WUBlastX DNA_Helitron 67890 71072 1724 - . . scaffold1489 70091 70092 DML_lineage scaffold1489 WUBlastX RC_Helitron 69762 71834 304 - . . scaffold1489 70091 70092 DML_lineage scaffold1489 WUBlastX RC_Helitron 64458 70424 2978 - . . scaffold1489 70091 70092 DML_lineage scaffold1489 WUBlastX RC_Helitron 65145 70205 3204 - . . scaffold1490 202236 202237 DML_lineage scaffold1490 WUBlastX DNA_NOF 202186 202485 213 + . . scaffold1527 134936 134937 DML_lineage scaffold1527 TRF Tandem_Repeat 134878 135097 327 + . . scaffold157 665243 665244 DML_lineage scaffold157 WUBlastX LTR_Gypsy 665229 666002 173 + . . scaffold1578 37185 37186 DML_lineage scaffold1578 WUBlastX LTR_DIRS 36366 37310 614 - . . scaffold1578 37185 37186 DML_lineage scaffold1578 WUBlastX LTR_DIRS 37017 37598 268 - . . scaffold1578 37352 37353 DML_lineage scaffold1578 WUBlastX LTR_DIRS 37017 37598 268 - . . scaffold1578 37517 37518 DML_lineage scaffold1578 WUBlastX LTR_DIRS 37017 37598 268 - . . scaffold1588 315064 315065 DML_lineage scaffold1588 WUBlastX DNA_MuDR 314452 316803 717 + . . scaffold1593 121 122 DML_lineage scaffold1593 WUBlastX DNA_IS 22 1239 2000 - . . scaffold1742 211658 211659 DML_lineage scaffold1742 TRF Tandem_Repeat 211604 211705 116 + . . scaffold1749 39605 39606 DML_lineage scaffold1749 WUBlastX LTR_Gypsy 38530 42471 2225 + . . scaffold1749 39634 39635 DML_lineage scaffold1749 WUBlastX LTR_Gypsy 38530 42471 2225 + . . scaffold1836 145404 145405 DML_lineage scaffold1836 WUBlastX LTR_Pao 142933 145704 1870 - . . scaffold1836 148438 148439 DML_lineage scaffold1836 WUBlastX LTR_Pao 145694 148462 1282 - . . scaffold209 216777 216778 DML_lineage scaffold209 WUBlastX LTR_Pao 215952 217175 153 - . . scaffold209 216777 216778 DML_lineage scaffold209 WUBlastX LTR_Pao 215952 217406 149 - . . scaffold209 216777 216778 DML_lineage scaffold209 WUBlastX LTR_Pao 215949 216965 254 - . . scaffold209 216807 216808 DML_lineage scaffold209 WUBlastX LTR_Pao 215952 217175 153 - . . scaffold209 216807 216808 DML_lineage scaffold209 WUBlastX LTR_Pao 215952 217406 149 - . . scaffold209 216807 216808 DML_lineage scaffold209 WUBlastX LTR_Pao 215949 216965 254 - . . scaffold209 216814 216815 DML_lineage scaffold209 WUBlastX LTR_Pao 215952 217175 153 - . . scaffold209 216814 216815 DML_lineage scaffold209 WUBlastX LTR_Pao 215952 217406 149 - . . scaffold209 216814 216815 DML_lineage scaffold209 WUBlastX LTR_Pao 215949 216965 254 - . . scaffold3 296705 296706 DML_lineage scaffold3 WUBlastX LTR_Gypsy-Cigr 296294 296779 77 + . . scaffold31 318740 318741 DML_lineage scaffold31 WUBlastX LTR_Pao 317671 319956 831 - . . scaffold33832 13692 13693 DML_lineage scaffold33832 TRF Tandem_Repeat 13687 13741 69 + . . scaffold33832 13697 13698 DML_lineage scaffold33832 TRF Tandem_Repeat 13687 13741 69 + . . scaffold33832 13702 13703 DML_lineage scaffold33832 TRF Tandem_Repeat 13687 13741 69 + . . scaffold33832 13740 13741 DML_lineage scaffold33832 TRF Tandem_Repeat 13687 13741 69 + . . scaffold33934 10057 10058 DML_lineage scaffold33934 WUBlastX LTR_Gypsy-Cigr 9749 10879 96 - . . scaffold33934 8469 8470 DML_lineage scaffold33934 WUBlastX LINE_L1-Tx1 7805 9076 748 - . . scaffold37532 12144 12145 DML_lineage scaffold37532 WUBlastX DNA_hAT-Blackja 12058 12264 58 + . . scaffold37532 12144 12145 DML_lineage scaffold37532 WUBlastX DNA_hAT-Blackja 12097 12306 67 + . . scaffold392 897112 897113 DML_lineage scaffold392 WUBlastX DNA_Kolobok 896988 897230 111 - . . scaffold394 578867 578868 DML_lineage scaffold394 TRF Tandem_Repeat 578651 579050 457 + . . scaffold413 10988 10989 DML_lineage scaffold413 WUBlastX LINE_L1 10977 11804 190 - . . scaffold41652 84532 84533 DML_lineage scaffold41652 TRF Tandem_Repeat 84210 84872 898 + . . scaffold41834 127784 127785 DML_lineage scaffold41834 WUBlastX RC_Helitron 127720 128313 369 + . . scaffold419 681323 681324 DML_lineage scaffold419 WUBlastX LTR_Gypsy 680767 682356 728 - . . scaffold419 681323 681324 DML_lineage scaffold419 WUBlastX LTR_Gypsy-Cigr 681034 684744 2539 - . . scaffold42408 116373 116374 DML_lineage scaffold42408 WUBlastX RC_Helitron 116084 117067 103 - . . scaffold42408 116477 116478 DML_lineage scaffold42408 WUBlastX RC_Helitron 116084 117067 103 - . . scaffold42790 159095 159096 DML_lineage scaffold42790 WUBlastX LTR_Gypsy 159000 159830 242 + . . scaffold42790 159095 159096 DML_lineage scaffold42790 WUBlastX LTR_Gypsy 159000 159452 288 + . . scaffold42790 159095 159096 DML_lineage scaffold42790 WUBlastX LTR_Gypsy 159000 159665 258 + . . scaffold43388 219751 219752 DML_lineage scaffold43388 WUBlastX DNA_IS4EU 219717 219797 27 - . . scaffold482 138872 138873 DML_lineage scaffold482 WUBlastX DNA_Kolobok-IS4 138840 139592 162 + . . scaffold482 138872 138873 DML_lineage scaffold482 WUBlastX DNA_IS4EU 138735 139637 121 + . . scaffold532 46439 46440 DML_lineage scaffold532 TRF Tandem_Repeat 45305 46705 2349 + . . scaffold532 46439 46440 DML_lineage scaffold532 TRF Tandem_Repeat 45306 46708 2382 + . . scaffold562 443389 443390 DML_lineage scaffold562 WUBlastX LTR_Gypsy 442265 443617 831 + . . scaffold562 443392 443393 DML_lineage scaffold562 WUBlastX LTR_Gypsy 442265 443617 831 + . . scaffold601 132778 132779 DML_lineage scaffold601 TRF Tandem_Repeat 131579 134528 2413 + . . scaffold602 87051 87052 DML_lineage scaffold602 WUBlastX LTR_Gypsy 86591 87124 161 + . . scaffold602 87051 87052 DML_lineage scaffold602 WUBlastX LTR_Gypsy 86330 87247 113 + . . scaffold602 87051 87052 DML_lineage scaffold602 WUBlastX LTR_Gypsy 86600 87337 113 + . . scaffold619 621709 621710 DML_lineage scaffold619 WUBlastX DNA_hAT-hATw 621597 624350 689 + . . scaffold619 621731 621732 DML_lineage scaffold619 WUBlastX DNA_hAT-hATw 621597 624350 689 + . . scaffold619 623845 623846 DML_lineage scaffold619 WUBlastX DNA_hAT-hATw 621597 624350 689 + . . scaffold672 130686 130687 DML_lineage scaffold672 WUBlastX DNA_MuDR 130455 132092 665 + . . scaffold721 378853 378854 DML_lineage scaffold721 TRF Tandem_Repeat 378796 379228 625 + . . scaffold77 411001 411002 DML_lineage scaffold77 WUBlastX LTR_Gypsy 410567 412702 1406 + . . scaffold77 411005 411006 DML_lineage scaffold77 WUBlastX LTR_Gypsy 410567 412702 1406 + . . scaffold773 175267 175268 DML_lineage scaffold773 WUBlastX LTR_Pao 170964 176408 2249 - . . scaffold852 66794 66795 DML_lineage scaffold852 WUBlastX LTR_Gypsy-Cigr 66717 69767 2144 - . . scaffold852 66794 66795 DML_lineage scaffold852 WUBlastX LTR_Gypsy 66714 70346 1793 - . . scaffold852 66794 66795 DML_lineage scaffold852 WUBlastX LTR_Gypsy 66624 67109 27 - . . scaffold852 66846 66847 DML_lineage scaffold852 WUBlastX LTR_Gypsy-Cigr 66717 69767 2144 - . . scaffold852 66846 66847 DML_lineage scaffold852 WUBlastX LTR_Gypsy 66714 70346 1793 - . . scaffold852 66846 66847 DML_lineage scaffold852 WUBlastX LTR_Gypsy 66624 67109 27 - . . scaffold852 70308 70309 DML_lineage scaffold852 WUBlastX LTR_Gypsy 66714 70346 1793 - . . scaffold86 1352881 1352882 DML_lineage scaffold86 WUBlastX DNA_Kolobok-Hyd 1352593 1353180 47 - . . scaffold86 1352881 1352882 DML_lineage scaffold86 WUBlastX DNA_Kolobok-Hyd 1352824 1353174 53 - . . scaffold86 203460 203461 DML_lineage scaffold86 WUBlastX LTR_Pao 200986 205353 2885 + . . scaffold86 203473 203474 DML_lineage scaffold86 WUBlastX LTR_Pao 200986 205353 2885 + . . scaffold86 203717 203718 DML_lineage scaffold86 WUBlastX LTR_Pao 200986 205353 2885 + . . scaffold880 337895 337896 DML_lineage scaffold880 TRF Tandem_Repeat 337859 338282 468 + . . scaffold880 337895 337896 DML_lineage scaffold880 TRF Tandem_Repeat 337868 338286 533 + . . scaffold880 337895 337896 DML_lineage scaffold880 TRF Tandem_Repeat 337868 338286 570 + . . scaffold885 13971 13972 DML_lineage scaffold885 WUBlastX DNA_Kolobok 13765 14010 136 - . . scaffold885 13977 13978 DML_lineage scaffold885 WUBlastX DNA_Kolobok 13765 14010 136 - . . scaffold9 100776 100777 DML_lineage scaffold9 WUBlastX LTR_Gypsy 98973 101873 2010 + . . scaffold968 140888 140889 DML_lineage scaffold968 WUBlastX LTR_Copia 139375 141270 1143 - . . scaffold992 63289 63290 DML_lineage scaffold992 TRF Tandem_Repeat 63166 63466 235 + . . scaffold992 63307 63308 DML_lineage scaffold992 TRF Tandem_Repeat 63166 63466 235 + . .