chr	start	end	strand	CT_count	freqC	freqT
C19902	166	166	+	5	0.6	0.4
C19902	184	184	+	6	0.666666667	0.333333333
C22844	56	56	+	5	0	1
C22844	58	58	+	5	0	1
C22844	86	86	+	8	0	1
C22844	114	114	+	9	0	1
C22844	126	126	+	9	0.111111111	0.888888889
C22844	129	129	+	8	0	1
C22844	137	137	+	6	0	1
C22844	139	139	+	6	0	1
C23878	2316	2316	+	5	0	1
C23878	2330	2330	+	8	0	1
C23878	2358	2358	+	9	0	1
C23878	2370	2370	+	10	0	1
C23878	2373	2373	+	10	0	1
C23878	2381	2381	+	10	0	1
C23878	2383	2383	+	10	0	1
C27244	2655	2655	+	8	0.875	0.125
C27244	2657	2657	+	6	0.666666667	0.333333333
C27244	2661	2661	+	6	0.833333333	0.166666667
C27244	2665	2665	+	8	1	0
C29424	5627	5627	+	7	0.142857143	0.857142857
C29424	5641	5641	+	6	0	1
C30514	67	67	+	8	0.5	0.5
C30514	94	94	+	11	0.727272727	0.272727273
C30514	112	112	+	5	0.6	0.4
C32176	401	401	+	5	0	1
C32176	418	418	+	5	0	1
C34176	75	75	+	5	0.8	0.2
scaffold1009	178488	178488	+	15	0	1
scaffold1009	178816	178816	+	14	0	1
scaffold1016	102692	102692	+	19	0	1
scaffold1016	132338	132338	+	7	0	1
scaffold1018	21448	21448	+	5	0	1
scaffold1053	77565	77565	+	5	1	0
scaffold11	277672	277672	+	8	0.75	0.25
scaffold11	277684	277684	+	8	1	0
scaffold110	150968	150968	+	13	0	1
scaffold1171	32371	32371	+	5	0	1
scaffold1171	32433	32433	+	7	0	1
scaffold1171	32457	32457	+	10	0	1
scaffold1171	33910	33910	+	6	0	1
scaffold123	256227	256227	+	5	1	0
scaffold123	256233	256233	+	5	0.8	0.2
scaffold1327	64458	64458	+	6	1	0
scaffold1348	6267	6267	+	5	1	0
scaffold1348	55464	55464	+	6	0	1
scaffold142	402459	402459	+	5	0	1
scaffold1597	250870	250870	+	7	0.142857143	0.857142857
scaffold161	114276	114276	+	14	0	1
scaffold161	114291	114291	+	18	0	1
scaffold161	115876	115876	+	15	0	1
scaffold161	115892	115892	+	25	0	1
scaffold161	115926	115926	+	24	0	1
scaffold161	115966	115966	+	24	0	1
scaffold161	115986	115986	+	24	0	1
scaffold161	116006	116006	+	21	0	1
scaffold161	116011	116011	+	20	0	1
scaffold161	116013	116013	+	20	0	1
scaffold161	116096	116096	+	24	0	1
scaffold161	116204	116204	+	14	0	1
scaffold161	116209	116209	+	12	0	1
scaffold161	116230	116230	+	19	0	1
scaffold161	116239	116239	+	18	0	1
scaffold161	116258	116258	+	14	0	1
scaffold161	116383	116383	+	40	0	1
scaffold161	116428	116428	+	42	0	1
scaffold161	116600	116600	+	100	0	1
scaffold161	116727	116727	+	26	0	1
scaffold161	116752	116752	+	23	0	1
scaffold161	116776	116776	+	15	0	1
scaffold161	116904	116904	+	50	0	1
scaffold161	116925	116925	+	141	0	1
scaffold161	117086	117086	+	41	0.024390244	0.975609756
scaffold161	117175	117175	+	17	0.058823529	0.941176471
scaffold161	117248	117248	+	15	0	1
scaffold161	117398	117398	+	39	0	1
scaffold161	117442	117442	+	50	0	1
scaffold161	117445	117445	+	48	0	1
scaffold161	117470	117470	+	30	0	1
scaffold161	117525	117525	+	12	0	1
scaffold161	117534	117534	+	18	0	1
scaffold161	117543	117543	+	22	0	1
scaffold161	117586	117586	+	19	0	1
scaffold161	117589	117589	+	20	0	1
scaffold161	117607	117607	+	18	0	1
scaffold161	117624	117624	+	20	0	1
scaffold161	117651	117651	+	20	0	1
scaffold161	117682	117682	+	21	0	1
scaffold161	117708	117708	+	18	0	1
scaffold161	117740	117740	+	16	0	1
scaffold161	117743	117743	+	16	0	1
scaffold161	117761	117761	+	20	0	1
scaffold161	117771	117771	+	24	0	1
scaffold161	117782	117782	+	26	0	1
scaffold161	117826	117826	+	22	0	1
scaffold161	117879	117879	+	28	0	1
scaffold161	117964	117964	+	24	0	1
scaffold161	118009	118009	+	11	0	1
scaffold161	118028	118028	+	8	0	1
scaffold161	118036	118036	+	10	0	1
scaffold161	118040	118040	+	10	0	1
scaffold161	118057	118057	+	12	0	1
scaffold161	118116	118116	+	75	0.013333333	0.986666667
scaffold161	118132	118132	+	97	0	1
scaffold161	118227	118227	+	78	0	1
scaffold161	118391	118391	+	33	0	1
scaffold161	118411	118411	+	59	0	1
scaffold161	118429	118429	+	69	0	1
scaffold161	118552	118552	+	43	0	1
scaffold161	118555	118555	+	43	0	1
scaffold161	118648	118648	+	57	0.01754386	0.98245614
scaffold161	118713	118713	+	42	0	1
scaffold161	118730	118730	+	43	0	1
scaffold161	118763	118763	+	35	0	1
scaffold161	118770	118770	+	34	0	1
scaffold161	118841	118841	+	37	0	1
scaffold161	118940	118940	+	16	0	1
scaffold161	118963	118963	+	16	0	1
scaffold161	118965	118965	+	16	0	1
scaffold161	119198	119198	+	80	0	1
scaffold161	119230	119230	+	89	0	1
scaffold161	119347	119347	+	30	0.033333333	0.966666667
scaffold161	119361	119361	+	36	0	1
scaffold161	119498	119498	+	25	0	1
scaffold161	119572	119572	+	63	0	1
scaffold161	119673	119673	+	36	0	1
scaffold161	119705	119705	+	26	0	1
scaffold161	119746	119746	+	37	0	1
scaffold161	119772	119772	+	44	0	1
scaffold161	119848	119848	+	95	0	1
scaffold161	119897	119897	+	95	0	1
scaffold161	120054	120054	+	33	0	1
scaffold161	120098	120098	+	34	0	1
scaffold161	120100	120100	+	34	0	1
scaffold161	120118	120118	+	31	0	1
scaffold161	120184	120184	+	39	0	1
scaffold161	120342	120342	+	107	0	1
scaffold161	120385	120385	+	120	0	1
scaffold161	120391	120391	+	129	0	1
scaffold161	120406	120406	+	127	0	1
scaffold161	120507	120507	+	22	0	1
scaffold161	120637	120637	+	19	0	1
scaffold161	120672	120672	+	27	0	1
scaffold161	120723	120723	+	41	0	1
scaffold161	120765	120765	+	26	0	1
scaffold161	120774	120774	+	28	0.035714286	0.964285714
scaffold161	120794	120794	+	18	0	1
scaffold161	120812	120812	+	17	0	1
scaffold161	120820	120820	+	17	0	1
scaffold161	120824	120824	+	15	0	1
scaffold161	120830	120830	+	12	0	1
scaffold161	120951	120951	+	66	0	1
scaffold161	121032	121032	+	46	0	1
scaffold161	121085	121085	+	24	0	1
scaffold161	121092	121092	+	26	0	1
scaffold161	121110	121110	+	32	0	1
scaffold161	121120	121120	+	35	0	1
scaffold161	121147	121147	+	40	0.025	0.975
scaffold161	121249	121249	+	29	0	1
scaffold161	121259	121259	+	30	0	1
scaffold161	121274	121274	+	21	0	1
scaffold161	121356	121356	+	20	0	1
scaffold161	121398	121398	+	27	0	1
scaffold161	121443	121443	+	32	0	1
scaffold161	121456	121456	+	32	0	1
scaffold161	121459	121459	+	33	0.060606061	0.939393939
scaffold161	121529	121529	+	38	0	1
scaffold161	121560	121560	+	39	0	1
scaffold161	121609	121609	+	74	0.013513514	0.986486486
scaffold161	121615	121615	+	72	0	1
scaffold161	121706	121706	+	125	0	1
scaffold161	121810	121810	+	22	0	1
scaffold161	121986	121986	+	38	0.026315789	0.973684211
scaffold161	121997	121997	+	40	0	1
scaffold161	122000	122000	+	40	0	1
scaffold161	122005	122005	+	39	0	1
scaffold161	122049	122049	+	51	0	1
scaffold161	122062	122062	+	52	0	1
scaffold161	122112	122112	+	30	0	1
scaffold161	122228	122228	+	60	0	1
scaffold161	122275	122275	+	99	0	1
scaffold161	122305	122305	+	153	0	1
scaffold161	122355	122355	+	182	0	1
scaffold161	122404	122404	+	120	0	1
scaffold161	122424	122424	+	98	0	1
scaffold161	122527	122527	+	12	0	1
scaffold161	122531	122531	+	11	0	1
scaffold161	122538	122538	+	8	0	1
scaffold161	122568	122568	+	13	0	1
scaffold161	122605	122605	+	19	0	1
scaffold161	122650	122650	+	36	0	1
scaffold161	122675	122675	+	48	0	1
scaffold161	122750	122750	+	109	0	1
scaffold161	122818	122818	+	45	0	1
scaffold161	122868	122868	+	121	0	1
scaffold161	122883	122883	+	154	0	1
scaffold161	122990	122990	+	70	0.014285714	0.985714286
scaffold161	122994	122994	+	66	0	1
scaffold161	123039	123039	+	27	0	1
scaffold161	123093	123093	+	27	0	1
scaffold161	123163	123163	+	29	0	1
scaffold161	123216	123216	+	24	0	1
scaffold161	123372	123372	+	33	0	1
scaffold161	123409	123409	+	32	0	1
scaffold161	123412	123412	+	31	0	1
scaffold161	123479	123479	+	89	0	1
scaffold161	123559	123559	+	8	0	1
scaffold161	123610	123610	+	11	0	1
scaffold161	123637	123637	+	13	0	1
scaffold161	123664	123664	+	15	0	1
scaffold161	123702	123702	+	17	0	1
scaffold161	123713	123713	+	23	0	1
scaffold161	123741	123741	+	39	0	1
scaffold161	123787	123787	+	51	0	1
scaffold161	123810	123810	+	68	0	1
scaffold161	123870	123870	+	147	0	1
scaffold161	123889	123889	+	138	0	1
scaffold161	124009	124009	+	34	0.029411765	0.970588235
scaffold161	124059	124059	+	25	0	1
scaffold161	124078	124078	+	24	0	1
scaffold161	124307	124307	+	79	0	1
scaffold161	124345	124345	+	86	0	1
scaffold161	124379	124379	+	78	0	1
scaffold161	124412	124412	+	70	0	1
scaffold161	124445	124445	+	43	0	1
scaffold161	124530	124530	+	29	0	1
scaffold161	124543	124543	+	28	0	1
scaffold161	124550	124550	+	33	0	1
scaffold161	124573	124573	+	47	0.042553191	0.957446809
scaffold161	124601	124601	+	52	0	1
scaffold161	124634	124634	+	34	0.029411765	0.970588235
scaffold161	124733	124733	+	60	0	1
scaffold161	124759	124759	+	57	0	1
scaffold161	124773	124773	+	33	0	1
scaffold161	124775	124775	+	30	0	1
scaffold161	124778	124778	+	32	0.03125	0.96875
scaffold161	124824	124824	+	44	0	1
scaffold161	124858	124858	+	33	0	1
scaffold161	124874	124874	+	26	0	1
scaffold161	124931	124931	+	12	0	1
scaffold161	124950	124950	+	17	0	1
scaffold161	124952	124952	+	16	0	1
scaffold161	124965	124965	+	23	0	1
scaffold161	125145	125145	+	78	0	1
scaffold161	125152	125152	+	87	0	1
scaffold161	125277	125277	+	77	0	1
scaffold161	125309	125309	+	31	0	1
scaffold161	125311	125311	+	29	0.034482759	0.965517241
scaffold161	125411	125411	+	15	0	1
scaffold161	125425	125425	+	17	0	1
scaffold161	125441	125441	+	20	0	1
scaffold161	125599	125599	+	22	0	1
scaffold161	125612	125612	+	23	0	1
scaffold161	125647	125647	+	27	0.037037037	0.962962963
scaffold161	125727	125727	+	26	0	1
scaffold161	125794	125794	+	35	0	1
scaffold161	125821	125821	+	33	0	1
scaffold161	125874	125874	+	31	0	1
scaffold161	126052	126052	+	102	0	1
scaffold161	126093	126093	+	55	0	1
scaffold161	126109	126109	+	37	0	1
scaffold161	126199	126199	+	158	0	1
scaffold161	126370	126370	+	35	0	1
scaffold161	126467	126467	+	25	0	1
scaffold161	126469	126469	+	24	0	1
scaffold161	126653	126653	+	45	0	1
scaffold161	126655	126655	+	45	0	1
scaffold161	126673	126673	+	37	0	1
scaffold161	126696	126696	+	26	0	1
scaffold161	126727	126727	+	18	0	1
scaffold161	126777	126777	+	21	0	1
scaffold161	126819	126819	+	26	0	1
scaffold161	126869	126869	+	18	0	1
scaffold161	126878	126878	+	17	0	1
scaffold161	126905	126905	+	24	0.041666667	0.958333333
scaffold161	126928	126928	+	30	0	1
scaffold161	126946	126946	+	47	0	1
scaffold161	127269	127269	+	62	0	1
scaffold161	127368	127368	+	110	0	1
scaffold161	127422	127422	+	94	0	1
scaffold161	127511	127511	+	32	0	1
scaffold161	127513	127513	+	30	0	1
scaffold161	127543	127543	+	39	0	1
scaffold161	127554	127554	+	43	0	1
scaffold161	127569	127569	+	48	0	1
scaffold161	127619	127619	+	35	0	1
scaffold161	127662	127662	+	16	0	1
scaffold161	127689	127689	+	15	0	1
scaffold161	127696	127696	+	17	0	1
scaffold161	127849	127849	+	28	0	1
scaffold161	127878	127878	+	26	0	1
scaffold161	127892	127892	+	25	0	1
scaffold161	127913	127913	+	24	0	1
scaffold161	127939	127939	+	22	0	1
scaffold161	128053	128053	+	14	0	1
scaffold161	128058	128058	+	12	0	1
scaffold161	128080	128080	+	19	0	1
scaffold161	128157	128157	+	27	0	1
scaffold161	128180	128180	+	62	0	1
scaffold161	128260	128260	+	189	0	1
scaffold161	128350	128350	+	36	0	1
scaffold161	128363	128363	+	34	0	1
scaffold161	128406	128406	+	48	0	1
scaffold161	128444	128444	+	42	0	1
scaffold161	128593	128593	+	55	0	1
scaffold161	128610	128610	+	48	0	1
scaffold161	128622	128622	+	45	0	1
scaffold161	128626	128626	+	44	0	1
scaffold161	128635	128635	+	39	0	1
scaffold161	128640	128640	+	44	0	1
scaffold161	128648	128648	+	42	0	1
scaffold161	128664	128664	+	59	0	1
scaffold161	128782	128782	+	64	0.015625	0.984375
scaffold161	128798	128798	+	56	0.017857143	0.982142857
scaffold161	128867	128867	+	62	0	1
scaffold161	128870	128870	+	62	0	1
scaffold161	128909	128909	+	26	0	1
scaffold161	128911	128911	+	24	0	1
scaffold161	128928	128928	+	21	0.047619048	0.952380952
scaffold161	128953	128953	+	22	0	1
scaffold161	128959	128959	+	26	0	1
scaffold161	128971	128971	+	27	0	1
scaffold161	128990	128990	+	33	0	1
scaffold161	129053	129053	+	27	0	1
scaffold161	129066	129066	+	25	0	1
scaffold161	129086	129086	+	25	0	1
scaffold161	129102	129102	+	24	0	1
scaffold161	129120	129120	+	18	0	1
scaffold161	129163	129163	+	17	0	1
scaffold161	129214	129214	+	40	0.025	0.975
scaffold161	129230	129230	+	46	0	1
scaffold161	129252	129252	+	66	0	1
scaffold161	129257	129257	+	70	0	1
scaffold161	129278	129278	+	92	0	1
scaffold161	129336	129336	+	80	0	1
scaffold161	129338	129338	+	83	0	1
scaffold161	129408	129408	+	41	0	1
scaffold161	129432	129432	+	64	0	1
scaffold161	129535	129535	+	55	0	1
scaffold161	129541	129541	+	53	0	1
scaffold1772	230157	230157	+	9	0.555555556	0.444444444
scaffold1772	230159	230159	+	9	0.666666667	0.333333333
scaffold1772	230221	230221	+	15	0	1
scaffold1772	230508	230508	+	9	0	1
scaffold1850	146648	146648	+	8	0.875	0.125
scaffold192	352646	352646	+	6	1	0
scaffold192	352650	352650	+	15	0.933333333	0.066666667
scaffold201	94080	94080	+	6	0	1
scaffold241	34217	34217	+	6	0	1
scaffold241	34254	34254	+	8	0	1
scaffold241	34265	34265	+	7	0	1
scaffold241	38196	38196	+	5	0	1
scaffold241	38472	38472	+	5	0	1
scaffold241	38497	38497	+	5	0	1
scaffold274	470127	470127	+	17	0.823529412	0.176470588
scaffold274	470133	470133	+	17	0.588235294	0.411764706
scaffold280	718683	718683	+	9	0	1
scaffold34742	19819	19819	+	5	0	1
scaffold348	402300	402300	+	5	0.8	0.2
scaffold348	402375	402375	+	9	0.555555556	0.444444444
scaffold34956	18326	18326	+	7	0	1
scaffold34956	18332	18332	+	8	0	1
scaffold34956	18391	18391	+	16	0	1
scaffold34956	18399	18399	+	16	0	1
scaffold34956	18433	18433	+	8	0	1
scaffold363	277262	277262	+	6	0.833333333	0.166666667
scaffold36432	21681	21681	+	14	0	1
scaffold37206	10883	10883	+	22	1	0
scaffold37400	2258	2258	+	5	0	1
scaffold37400	2266	2266	+	5	0	1
scaffold37400	2268	2268	+	5	0	1
scaffold37400	2271	2271	+	5	0	1
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