eagle/QPX_genome

# Contains QPX genome assembly and annotations.

# Description of genome assembly:

QPX_v0.1.7
CLC v5.1 Mismatch cost = 2; Perform scaffolding = Yes; Mapping mode = Map reads back to contigs (slow); Deletion cost = 3; Similarity fraction = 0.9; Length fraction = 0.8; Insertion cost = 3; Update contigs = Yes; Automatic word size = Yes; Minimum contig length = 10000; Automatic bubble size = Yes; input: filtered_QPX_DNA_GTGAAA_L001_R1 trimmed
Same naming structure as v0.1.5

# Description of assembly was copy/pasted from the following link. Note, this link goes offline July 2018:

https://bio533.wikispaces.com/QPX+Genome+Annotation


# Files

- QPX_v017.fasta : FastA file of genome assembly.


# At the time of this readme creation (20180606), the contents of the other files is unknown.