scaffold1058 TRF Tandem_Repeat 7317 7352 54 + . . scaffold1288 TRF Tandem_Repeat 76959 77000 84 + . . scaffold1409 TRF Tandem_Repeat 227912 227954 325 + . . scaffold146 TRF Tandem_Repeat 682438 682493 103 + . . scaffold1518 TRF Tandem_Repeat 492976 493176 504 + . . scaffold1579 TRF Tandem_Repeat 9998 10023 52 + . . scaffold1579 TRF Tandem_Repeat 10895 10981 95 + . . scaffold1723 TRF Tandem_Repeat 49675 50080 227 + . . scaffold1723 TRF Tandem_Repeat 49672 50027 302 + . . scaffold1769 TRF Tandem_Repeat 64805 65358 745 + . . scaffold1832 TRF Tandem_Repeat 450554 451215 788 + . . scaffold1832 TRF Tandem_Repeat 450554 451215 932 + . . scaffold1890 TRF Tandem_Repeat 48995 49059 130 + . . scaffold40050 TRF Tandem_Repeat 47833 47877 65 + . . scaffold41588 TRF Tandem_Repeat 68236 68562 430 + . . scaffold41588 TRF Tandem_Repeat 68236 68539 486 + . . scaffold42144 TRF Tandem_Repeat 122450 122485 63 + . . scaffold42144 TRF Tandem_Repeat 122694 122838 112 + . . scaffold42740 TRF Tandem_Repeat 41845 41874 70 + . . scaffold42784 TRF Tandem_Repeat 52816 52858 86 + . . scaffold500 TRF Tandem_Repeat 155086 155160 123 + . . scaffold510 TRF Tandem_Repeat 29445 29492 96 + . . scaffold510 TRF Tandem_Repeat 29817 29865 98 + . . scaffold57 TRF Tandem_Repeat 111182 112068 2286 + . . scaffold58 TRF Tandem_Repeat 134981 135042 54 + . . scaffold616 TRF Tandem_Repeat 237420 238180 1414 + . . scaffold625 TRF Tandem_Repeat 437902 437987 287 + . . scaffold790 TRF Tandem_Repeat 271108 271183 817 + . . scaffold790 TRF Tandem_Repeat 271108 271183 799 + . . scaffold790 TRF Tandem_Repeat 271108 271406 678 + . . scaffold854 TRF Tandem_Repeat 708495 708528 59 + . . scaffold955 TRF Tandem_Repeat 16096 16137 84 + . . scaffold987 TRF Tandem_Repeat 311619 311693 89 + . . scaffold163 WUBlastX LTR_Gypsy 477239 477280 30 + . . scaffold1237 WUBlastX LTR_Gypsy 224046 224449 291 - . . scaffold772 WUBlastX DNA_hAT-Blackja 242463 242822 77 + . . scaffold42784 WUBlastX LTR_Pao 52390 52808 164 + . . scaffold499 WUBlastX LTR_Ngaro 25831 25922 144 + . . scaffold563 WUBlastX LINE_CR1 263015 263476 383 - . . scaffold77 WUBlastX LINE_RTE-BovB 1596953 1597213 162 + . . scaffold1362 WUBlastX LTR_Gypsy 202128 202513 425 + . . scaffold499 WUBlastX LTR_Ngaro 25632 25813 109 + . . scaffold579 WUBlastX LINE_RTE-BovB 268535 268611 202 + . . scaffold579 WUBlastX LINE_RTE-BovB 268604 269020 186 + . . scaffold563 WUBlastX LINE_L2 263027 263526 98 - . . scaffold1237 WUBlastX LTR_Gypsy 223708 224433 282 - . . scaffold1237 WUBlastX LTR_Gypsy 224433 224449 430 - . . scaffold1036 WUBlastX DNA_TcMar-Tc1 174808 174920 109 + . . scaffold340 WUBlastX DNA_IS4EU 217079 217495 180 + . . scaffold340 WUBlastX DNA_IS4EU 218538 219605 307 + . . scaffold149 WUBlastX LINE_L1-Tx1 347932 348085 57 - . . scaffold226 WUBlastX LTR_Ngaro 468266 468316 145 + . . scaffold226 WUBlastX LTR_Ngaro 468390 468514 384 + . . scaffold42784 WUBlastX LTR_Pao 53037 53122 58 + . . scaffold149 WUBlastX LINE_L1-Tx1 348067 348189 56 - . . scaffold340 WUBlastX DNA_IS4EU 217902 218030 109 + . . scaffold563 WUBlastX LINE_CR1 262912 263007 336 - . . scaffold1362 WUBlastX LTR_Gypsy 202128 202450 1167 + . . scaffold1879 WUBlastX LINE_CR1 121924 122272 357 - . . scaffold1362 WUBlastX LTR_Gypsy-Cigr 202128 202992 1285 + . . scaffold163 WUBlastX LTR_Gypsy 476425 476997 38 + . . scaffold163 WUBlastX LTR_Gypsy 477731 477931 41 + . . scaffold340 WUBlastX DNA_IS4EU 217890 218042 86 + . . scaffold772 WUBlastX DNA_hAT-hAT5 243667 243750 54 + . . scaffold563 WUBlastX LINE_CR1 262967 263526 113 - . . scaffold163 WUBlastX LTR_Gypsy 476434 476898 167 + . . scaffold42784 WUBlastX LTR_Pao 52390 52401 27 + . . scaffold42784 WUBlastX LTR_Pao 52861 53025 118 + . . scaffold42784 WUBlastX LTR_Pao 52998 53122 132 + . . scaffold1237 WUBlastX LTR_Gypsy 223213 223474 182 - . . scaffold42866 WUBlastX DNA_IS4EU 71251 72201 102 - . . scaffold226 WUBlastX LTR_Ngaro 468325 468417 43 + . . scaffold772 WUBlastX DNA_hAT-Charlie 242445 242873 63 + . . scaffold1535 WUBlastX DNA_Harbinger 70403 70847 146 - . . scaffold1036 WUBlastX DNA_TcMar-Tc1 174736 174920 22 + . . scaffold1532 WUBlastX DNA_Kolobok 587374 587454 24 - . . scaffold1532 WUBlastX DNA_Kolobok 587688 587897 92 - . . scaffold789 WUBlastX LINE_CR1 453182 453454 576 + . . scaffold772 WUBlastX DNA_hAT-Blackja 242430 242954 58 + . . scaffold163 WUBlastX LTR_Gypsy 476053 476913 38 + . . scaffold499 WUBlastX LTR_Ngaro 25632 25816 85 + . . scaffold1879 WUBlastX LINE_CR1-L2 121924 121999 737 - . . scaffold1532 WUBlastX DNA_Kolobok 587670 587996 88 - . . scaffold42866 WUBlastX DNA_IS4EU 71332 71997 105 - . . scaffold404 WUBlastX DNA_Zator 335877 336616 1397 + . . scaffold163 WUBlastX LTR_Gypsy 476329 476877 59 + . . scaffold1535 WUBlastX DNA_Harbinger 70403 71009 103 - . . scaffold163 WUBlastX LTR_Gypsy 477755 478108 36 + . . scaffold42866 WUBlastX DNA_IS4EU 71251 71763 113 - . . scaffold1237 WUBlastX LTR_Gypsy 223213 224421 112 - . . scaffold180 WUBlastX RC_Helitron 36819 36995 71 - . . scaffold115 WUBlastX DNA_TcMar-Marin 624640 624642 28 + . . scaffold226 WUBlastX LTR_Gypsy 468313 468357 25 + . .