Directory Listing of /bivalvia/

wholegenomefiles_MBDbsSeq_gill/wholegenomefiles_MBDbsSeq_gill/ - Oct 09 2013 11:07:39 AM
skitch/skitch/ - Aug 22 2014 01:48:32 PM
Sigenae for methylation archive/Sigenae for methylation archive/ - May 09 2013 10:15:18 AM
SEYH_FlexYourMussels/SEYH_FlexYourMussels/ - Mar 20 2014 11:58:19 AM
sexyoysters2014/sexyoysters2014/ - Dec 16 2013 06:36:17 AM
repro_ish/repro_ish/ - Sep 13 2013 11:31:53 AM
Pyromark primers for EE2 validation/Pyromark primers for EE2 validation/ - Jul 10 2014 01:09:55 PM
PryoMark Assay D/PryoMark Assay D/ - Oct 11 2011 09:23:36 AM
nanostring/nanostring/ - Jul 15 2014 03:48:05 PM
GIA2013_EpiAbstracts/GIA2013_EpiAbstracts/ - Sep 16 2013 02:07:29 PM
gel_and_other_images/gel_and_other_images/ - Jun 17 2014 03:19:54 PM
FISH441/FISH441/ - Nov 07 2012 01:00:16 PM
files_for_methylKit/files_for_methylKit/ - Dec 20 2013 01:01:29 PM
EE2 trial/EE2 trial/ - Mar 27 2013 02:25:15 PM
course materials/course materials/ - Jul 16 2013 05:01:18 PM
bivalviabisulfiteconvert/bivalviabisulfiteconvert/ - May 19 2014 03:57:34 PM
bioinformatics/bioinformatics/ - Nov 13 2013 09:11:43 AM
array design/array design/ - Mar 12 2014 11:38:45 AM
array/array/ - Aug 20 2014 12:34:56 PM
~$CG 500k master file_dummyvariables.xlsx~$CG 500k master file_dummyvariables.xlsx 0KB Oct 25 2012 12:45:46 PM
y.csvy.csv 1KB May 24 2013 01:13:21 PM
TGRJ_genomic_gene_CGstats.csvTGRJ_genomic_gene_CGstats.csv 1282KB Oct 14 2013 10:00:04 AM
Table S14_Zhang et al 2012 Supplementary Table.xlsTable S14_Zhang et al 2012 Supplementary... 29630KB Nov 01 2012 03:38:21 PM
SWISS PROT ID_GOterm_ONLYassociationfile.tabularSWISS PROT ID_GOterm_ONLYassociationfile... 783728KB Oct 15 2012 02:11:47 PM
sequence44098_293677sequence44098_293677 1KB May 20 2014 04:46:25 PM
scaffold748wDMRscaffold748wDMR 1KB May 19 2014 02:02:46 PM
scaffold13wDMRscaffold13wDMR 1KB May 19 2014 01:51:16 PM
SalishSea_Gavery.pptxSalishSea_Gavery.pptx 16331KB Apr 30 2014 11:50:52 AM
Rplotcorrelation.pdfRplotcorrelation.pdf 466KB Dec 29 2012 09:32:26 AM
Rplotcorrelation.jpgRplotcorrelation.jpg 147KB Dec 29 2012 09:34:31 AMRplotcorrelation.jpg
revised.noaa-oar-sg-2014-2003987.gkim020714 (2).pdfrevised.noaa-oar-sg-2014-2003987.gkim020... 320KB Apr 07 2014 09:54:08 AM
Quote_StevenRoberts_UW_2013-08-05.pdfQuote_StevenRoberts_UW_2013-08-05.pdf 132KB Aug 05 2013 12:02:41 PM
PyromarkPCRprimerseqs.faPyromarkPCRprimerseqs.fa 0KB May 20 2014 05:09:00 PM
Proposal_FISH560_Gavery.docxProposal_FISH560_Gavery.docx 147KB Oct 18 2012 09:03:26 AM
photo.JPGphoto.JPG 1129KB Mar 20 2013 09:22:39 AMphoto.JPG
PhD final exam.pptxPhD final exam.pptx 39471KB Jun 04 2014 11:50:01 AM
oyster_v9_gene.fastaoyster_v9_gene.fasta 36470KB May 03 2013 02:02:40 PM
oysterv9_M number exons per length.xlsxoysterv9_M number exons per length.xlsx 206KB Oct 05 2012 10:56:15 PM
oyslogtheatmap.pdfoyslogtheatmap.pdf 5066KB Oct 12 2012 02:17:43 PM
oversimplified_stochastic.pptxoversimplified_stochastic.pptx 77KB Dec 09 2013 02:49:20 PM
oversimplified_stochastic.pdfoversimplified_stochastic.pdf 20KB Dec 09 2013 02:49:15 PM
Oly_blastx_table.txtOly_blastx_table.txt 1826KB Mar 15 2013 10:56:58 AM
NOTdiffmeth_win25percent_bytissue_100bptile_v9_90_3.txtNOTdiffmeth_win25percent_bytissue_100bpt... 8221KB Feb 19 2013 12:47:56 PM
NOTdiffmeth_bytissue_100bptile_v9_90_3.bedNOTdiffmeth_bytissue_100bptile_v9_90_3.bed 10919KB Feb 19 2013 12:37:24 PM
NOTdiffmeth_bytissue_100bptile_v9_90.txtNOTdiffmeth_bytissue_100bptile_v9_90.txt 9264KB Feb 19 2013 11:01:13 AM
mydif_NLT50%diff.txtmydif_NLT50%diff.txt 944KB Jan 03 2013 09:25:18 AM
MG_CV_0313.docxMG_CV_0313.docx 140KB Mar 07 2013 12:29:10 PM
MG CV working.docxMG CV working.docx 139KB Mar 07 2013 12:27:07 PM
meth_review_PROOF.pdfmeth_review_PROOF.pdf 419KB Dec 09 2013 02:08:08 PM
meth_combinedCG_mRNA.bedmeth_combinedCG_mRNA.bed 53400KB May 05 2013 03:53:41 PM
methylkit6_jaccards.pdfmethylkit6_jaccards.pdf 112KB Nov 14 2013 12:05:10 PM
methylkit6_heatmap.pdfmethylkit6_heatmap.pdf 217KB Nov 14 2013 11:55:18 AM
methylation_data_workflow.docxmethylation_data_workflow.docx 134KB Jul 10 2013 09:40:14 AM
methylated CG as gff.txtmethylated CG as gff.txt 11577KB Dec 11 2012 02:15:39 PM
MBD_BS_oysterv9_M_wiggle.txtMBD_BS_oysterv9_M_wiggle.txt 3365KB Oct 04 2012 01:14:32 AM
list with gt5x coverage.txtlist with gt5x coverage.txt 199KB Jan 03 2013 02:12:44 PM
list in TE.txtlist in TE.txt 9KB Jan 03 2013 03:23:04 PM
list in prom.txtlist in prom.txt 21KB Jan 03 2013 03:22:31 PM
list in CDS.txtlist in CDS.txt 29KB Jan 03 2013 02:14:12 PM
list as mRNA.txtlist as mRNA.txt 163KB Jan 03 2013 02:14:51 PM
list annotated w mrna prom te.txtlist annotated w mrna prom te.txt 193KB Jan 03 2013 02:13:22 PM
list all2.txtlist all2.txt 445KB Jan 03 2013 02:51:29 PM
list all.txtlist all.txt 445KB Jan 03 2013 02:11:56 PM
lab meeting 111113.pptxlab meeting 111113.pptx 407KB Nov 11 2013 08:51:00 AM
lab meeting 041513.pptxlab meeting 041513.pptx 334KB Apr 15 2013 08:49:19 AM
lab meeting 041513.pdflab meeting 041513.pdf 646KB Apr 15 2013 08:51:41 AM
July25meeting.pptxJuly25meeting.pptx 348KB Jul 25 2013 09:07:31 AM
joined tiles to sam.xlsxjoined tiles to sam.xlsx 80404KB Jan 03 2013 12:10:43 PM
joined tiles to sam.intervaljoined tiles to sam.interval 187476KB Jan 03 2013 11:26:26 AM
intervals_notmeth_mRNA_counts2.txtintervals_notmeth_mRNA_counts2.txt 1832KB Feb 19 2013 11:43:59 AM
intervals_notmeth_mRNA_counts.txtintervals_notmeth_mRNA_counts.txt 1832KB Feb 19 2013 11:34:03 AM
intervals_notmeth_mRNA.txtintervals_notmeth_mRNA.txt 1777KB Feb 19 2013 11:30:06 AM
intervalsnotmeth.txtintervalsnotmeth.txt 0KB Feb 19 2013 11:19:51 AM
GIA_2013_Gavery.pptxGIA_2013_Gavery.pptx 7365KB Sep 05 2013 11:48:38 PM
gene v mRNA v individ exons.jpggene v mRNA v individ exons.jpg 56KB Dec 14 2012 10:17:54 AMgene v mRNA v individ exons.jpg
Gavery_041514.pptxGavery_041514.pptx 1414KB Apr 15 2014 12:14:05 PM
Galaxy112-[mRNA].gffGalaxy112-[mRNA].gff 1777KB Feb 19 2013 11:18:21 AM
Galaxy61-[all_CG_dinucleotides].tabularGalaxy61-[all_CG_dinucleotides].tabular 148266KB May 02 2013 09:22:32 AM
Galaxy4-[Galaxy1-(http___eagle.fish.washington.edu_cnidarian_TJGR_RPM_oyster.v9_90.fa.annot).txt] (1).gffGalaxy4-[Galaxy1-(http___eagle.fish.wash... 6327KB Feb 12 2013 02:21:26 PM
Format Data Series.jpgFormat Data Series.jpg 122KB Nov 29 2012 11:32:36 AMFormat Data Series.jpg
FISH441_normgene_RFUandMiner.xlsFISH441_normgene_RFUandMiner.xls 136KB Jul 29 2013 12:56:16 PM
Figure_USDAworkflow.pptxFigure_USDAworkflow.pptx 107KB Apr 17 2014 02:23:24 PM
Figure2.pngFigure2.png 12KB Dec 09 2013 02:52:40 PMFigure2.png
Figure1.pngFigure1.png 12KB Dec 09 2013 02:54:23 PMFigure1.png
ExpressedGeneStats_varsub.xlsxExpressedGeneStats_varsub.xlsx 4540KB Jul 16 2013 11:38:38 AM
ExpressedGeneStats.xlsxExpressedGeneStats.xlsx 6983KB Aug 01 2013 11:37:15 AM
exons.csvexons.csv 2650KB Oct 29 2012 03:42:14 PM
excel of final summary of diff meth tiles.xlsxexcel of final summary of diff meth tile... 29KB Jan 03 2013 03:33:36 PM
Epi_primer_FISH441_Gavery.pdfEpi_primer_FISH441_Gavery.pdf 11977KB Nov 04 2013 10:50:30 AM
DMRvisAnnotated_CGIstats_TJGRGeneSPID.csvDMRvisAnnotated_CGIstats_TJGRGeneSPID.csv 15KB Mar 05 2014 04:23:02 PM
decile_comparison.jpgdecile_comparison.jpg 57KB Oct 28 2013 11:18:25 AMdecile_comparison.jpg
Claires_array_session_withMacsdata.xmlClaires_array_session_withMacsdata.xml 7KB Jun 18 2014 09:58:41 AM
Cgigas_v9_exonsGFF_sortedCgigas_v9_exonsGFF_sorted 12070KB Nov 25 2013 03:05:55 PM
Cgigas_mitochondrialgenome.fastaCgigas_mitochondrialgenome.fasta 18KB Nov 18 2013 02:58:30 PM
CGbigill5x_gt50.gffCGbigill5x_gt50.gff 73548KB May 31 2013 11:59:07 AM
CGbigill5x_asgff.txtCGbigill5x_asgff.txt 130683KB May 28 2013 06:23:46 PM
CG 500k master file.xlsxCG 500k master file.xlsx 67948KB Oct 26 2012 03:23:22 PM
cDNA plate FISH 441.jpgcDNA plate FISH 441.jpg 1061KB Nov 29 2012 08:58:29 AMcDNA plate FISH 441.jpg
bsmap_v_bismark summary.jpgbsmap_v_bismark summary.jpg 127KB May 20 2013 03:18:43 PMbsmap_v_bismark summary.jpg
Bivalve_Review5_Revision.docxBivalve_Review5_Revision.docx 110KB Oct 29 2013 01:35:30 PM
bisulfiteconvert.revcompNAME.oyster.v9.fabisulfiteconvert.revcompNAME.oyster.v9.fa 554729KB May 20 2014 10:46:23 AM
bisulfiteconvert.revcomp.oyster.v9.fabisulfiteconvert.revcomp.oyster.v9.fa 554718KB May 20 2014 09:48:46 AM
bisulfiteconvert.oyster.v9.fabisulfiteconvert.oyster.v9.fa 545632KB May 19 2014 03:12:18 PM
bisulfiteconvert.oyster.v9.BLASToutput.v2bisulfiteconvert.oyster.v9.BLASToutput.v2 14KB May 20 2014 05:09:43 PM
bisulfiteconvert.oyster.v9.BLASToutputbisulfiteconvert.oyster.v9.BLASToutput 8KB May 20 2014 12:18:12 PM
bisulfiteconvert.bothstrands.oyster.v9.fabisulfiteconvert.bothstrands.oyster.v9.fa 1100361KB May 20 2014 10:52:33 AM
Bioinformatics_2014.pptxBioinformatics_2014.pptx 476KB Mar 19 2014 10:20:21 AM
BiGo_Larvae_joineddata.txtBiGo_Larvae_joineddata.txt 0KB Nov 05 2013 08:50:43 AM
annotated list of 6500 regions with 2kb flanks of mRNA w e value LT1e-5.txtannotated list of 6500 regions with 2kb ... 6815KB Oct 18 2012 01:55:54 PM
allgenestats_justCGIandGenemeth.txtallgenestats_justCGIandGenemeth.txt 574KB Oct 11 2013 09:06:48 AM
allgenestats.txtallgenestats.txt 8343KB May 22 2013 12:17:01 PM
All data 1059 genes.xlsAll data 1059 genes.xls 631KB Feb 11 2013 11:49:00 AM
AGA_Gavery_2014_poster_final.pngAGA_Gavery_2014_poster_final.png 186KB Jun 25 2014 02:17:18 PMAGA_Gavery_2014_poster_final.png
AGA_cpg_MG.mdAGA_cpg_MG.md 4KB Jun 25 2014 02:23:41 PM
06192014qPCRlayout.pdf06192014qPCRlayout.pdf 3055KB Jun 19 2014 11:06:37 AM
546306A02_121101-OysterV9-MG.textClipping546306A02_121101-OysterV9-MG.textClipping 0KB Feb 21 2014 10:48:05 AM
070914bisulfite.pdf070914bisulfite.pdf 1213KB Jul 09 2014 04:23:54 PM
062714bisulfite.pdf062714bisulfite.pdf 3712KB Jun 27 2014 01:09:15 PM
062514bisulfitepcrlayout.pdf062514bisulfitepcrlayout.pdf 3282KB Jun 25 2014 03:56:29 PM
032013.BMP032013.BMP 2916KB Mar 29 2013 12:10:36 PM
500k_CG_methstatus_oysterv9_M.gff500k_CG_methstatus_oysterv9_M.gff 31147KB Oct 05 2012 12:11:04 AM
500k CG_oysterv9_M_annotated.interval500k CG_oysterv9_M_annotated.interval 296549KB Oct 04 2012 03:45:17 AM
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