================================================================ Program: CD-HIT, V4.3 (+OpenMP), Oct 26 2010, 16:05:57 Command: cd-hit-est -i 1373313249.fas.0 -d 0 -o 1373313249.fas.1 -c 0.9 -n 8 -r 0 -G 1 -g 1 -b 20 -s 0.0 -aL 0.0 -aS 0.0 Started: Mon Jul 8 12:54:27 2013 ================================================================ Output ---------------------------------------------------------------- total seq: 3058 longest and shortest : 21638 and 10002 Total letters: 38598330 Sequences have been sorted Approximated minimal memory consumption: Sequence : 39M Buffer : 1 X 22M = 22M Table : 1 X 1M = 1M Miscellaneous : 0M Total : 63M Table limit with the given memory limit: Max number of representatives: 4161536 Max number of word counting entries: 92090959 comparing sequences from 0 to 3058 .......... .......... 1000 finished 1000 clusters .......... .......... 2000 finished 2000 clusters .......... .......... 3000 finished 3000 clusters 3058 finished 3058 clusters Apprixmated maximum memory consumption: 322M writing new database writing clustering information program completed ! Total CPU time 17819