Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.04

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold481
Parameters: 2 7 7 80 10 50 500
Length:  1334154

Tables:   1   2   3   4   

This is table  4  of  4  ( 385 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1215311--1215393
21
4.0
21
89
4
125
37
21
13
27
1.91
1215634--1215713
21
3.8
21
88
4
117
41
23
8
26
1.83
1217370--1217419
24
2.1
24
100
0
100
42
18
8
32
1.79
1230301--1230744
172
2.6
170
92
2
728
28
19
15
36
1.93
1240718--1241232
168
3.0
168
83
7
628
32
13
27
26
1.94
1242727--1242803
22
3.4
22
87
5
100
40
10
9
40
1.71
1242797--1242834
11
3.3
12
85
10
53
50
18
5
26
1.68
1243385--1243420
13
3.0
12
88
11
56
25
8
0
66
1.19
1245250--1246270
186
5.5
186
90
0
1580
40
10
12
36
1.78
1245259--1246270
373
2.7
372
94
0
1722
40
10
12
36
1.77
1264221--1264304
42
2.0
42
97
0
159
40
17
15
26
1.89
1268592--1268661
21
3.3
21
77
15
90
15
20
22
41
1.90
1268582--1268671
42
2.1
42
97
0
171
17
21
20
41
1.91
1268592--1268673
21
3.9
21
75
15
80
15
19
21
42
1.89
1272962--1273034
2
36.5
2
100
0
146
50
0
49
0
1.00
1273097--1273146
2
25.0
2
95
0
91
52
0
48
0
1.00
1274615--1274659
2
22.5
2
100
0
90
48
0
51
0
1.00
1280362--1280395
18
1.9
18
94
5
61
23
5
11
58
1.55
1292112--1292154
8
5.4
8
85
0
59
2
37
25
34
1.69
1292120--1292159
12
3.3
12
89
0
62
0
37
25
37
1.56
1292111--1292159
16
3.1
16
87
0
71
2
38
24
34
1.67
1312276--1312350
2
37.5
2
97
0
141
0
50
1
48
1.09
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1319236--1319268
9
3.8
9
88
4
50
81
0
0
18
0.68
1319225--1319268
18
2.4
19
88
3
63
77
0
2
20
0.88
1323500--1323526
12
2.2
12
100
0
54
85
0
7
7
0.75

Tables:   1   2   3   4

The End!