Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.04
Please cite: G. Benson, "Tandem repeats finder: a program to analyze DNA sequences" Nucleic Acid Research(1999) Vol. 27, No. 2, pp. 573-580. Sequence: scaffold471 Parameters: 2 7 7 80 10 50 500 Length: 1282308

Tables:   1   2   3   4   

This is table  4  of  4  ( 419 repeats found )
Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1113080--1113176
24
4.0
24
94
0
158
36
16
19
27
1.93
1118548--1118596
2
24.5
2
100
0
98
48
0
51
0
1.00
1121304--1121358
28
2.0
28
92
0
92
61
0
20
18
1.34
1121314--1121356
13
3.2
13
77
9
50
65
0
18
16
1.28
1122261--1122297
2
18.5
2
100
0
74
0
48
0
51
1.00
1135412--1135447
11
3.0
12
84
15
56
36
0
22
41
1.54
1135408--1135445
11
3.4
11
83
16
51
34
0
18
47
1.49
1142554--1142581
2
14.0
2
100
0
56
50
0
50
0
1.00
1142977--1143052
36
2.1
35
81
13
93
48
0
0
51
1.00
1142990--1143031
9
4.6
10
80
19
56
50
0
0
50
1.00
1151672--1151702
16
1.9
16
100
0
62
22
19
12
45
1.84
1166965--1167003
18
2.2
18
100
0
78
25
5
10
58
1.51
1172762--1173108
65
5.3
65
85
9
490
23
20
21
34
1.97
1172762--1173108
131
2.6
131
96
0
640
23
20
21
34
1.97
1173759--1173795
16
2.5
15
91
8
58
35
18
10
35
1.86
1173766--1173803
16
2.4
16
86
0
58
31
18
15
34
1.92
1174751--1174860
50
2.2
50
83
4
134
32
15
10
40
1.82
1177241--1177387
59
2.4
59
87
5
213
34
7
17
40
1.77
1195204--1195235
2
16.0
2
100
0
64
50
50
0
0
1.00
1215600--1215625
2
13.0
2
100
0
52
0
50
0
50
1.00
1215638--1215687
4
12.5
4
100
0
100
26
24
0
50
1.50
1217990--1218017
2
14.0
2
100
0
56
0
50
0
50
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1218824--1218855
16
2.0
16
93
0
55
50
18
15
15
1.79
1225246--1225340
11
9.0
11
93
6
162
37
37
9
14
1.79
1225246--1225342
21
4.6
21
94
5
162
38
38
9
14
1.78
1225246--1225340
32
3.0
32
98
1
183
37
37
9
14
1.79
1234712--1234764
2
26.5
2
96
0
97
0
49
0
50
1.00
1237615--1237691
21
3.7
21
89
5
111
36
22
16
24
1.94
1239510--1239579
2
35.0
2
97
0
131
51
0
48
0
1.00
1240084--1240135
2
26.0
2
100
0
104
0
50
0
50
1.00
1241722--1241902
21
8.7
21
90
5
271
16
8
37
37
1.80
1241722--1241903
11
17.4
11
84
11
123
17
8
37
36
1.80
1241690--1241902
42
5.1
39
85
9
214
16
8
36
38
1.79
1246781--1247079
101
3.0
101
95
0
517
38
13
18
28
1.89
1246848--1247006
50
3.2
50
63
12
126
37
13
18
30
1.89
1247361--1247512
33
4.6
33
75
6
121
44
26
11
17
1.84
1247821--1247888
9
7.6
9
89
0
109
41
0
14
44
1.45
1253678--1253717
16
2.5
17
84
12
57
22
17
10
50
1.76
1259244--1259278
11
2.9
12
87
12
54
8
17
25
48
1.75
1259483--1259525
11
3.8
11
81
6
59
46
32
11
9
1.72
1259481--1259530
23
2.2
23
96
3
93
42
32
16
10
1.81
1262753--1262788
3
12.0
3
93
0
63
33
36
0
30
1.58
1262729--1262787
12
4.9
12
93
0
73
30
38
0
30
1.57
1268357--1268530
89
2.0
89
91
2
287
26
14
27
31
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1269710--1269760
26
2.0
25
84
3
66
23
25
15
35
1.94
1269737--1269840
42
2.5
42
88
0
154
18
21
20
40
1.92
1269747--1269844
21
4.7
21
76
7
92
18
19
20
41
1.90
1270522--1270574
21
2.5
21
93
0
88
11
18
24
45
1.82
1271010--1271038
14
2.1
14
100
0
58
41
31
13
13
1.84
1277377--1277425
23
2.1
23
92
0
80
34
14
12
38
1.83
1278336--1278384
14
3.5
14
86
8
64
83
16
0
0
0.64
1278344--1278379
14
2.6
14
100
0
72
94
5
0
0
0.31
1278344--1278379
1
36.0
1
88
0
54
94
5
0
0
0.31
1278369--1278411
18
2.4
18
80
0
59
65
32
0
2
1.06
1278405--1278442
15
2.5
16
91
8
62
78
21
0
0
0.74
1278414--1278452
19
2.1
19
90
0
60
84
15
0
0
0.62
1278414--1278452
9
4.2
9
80
6
51
84
15
0
0
0.62
1278651--1278722
21
3.5
21
81
7
85
43
16
13
26
1.86
1281685--1281714
12
2.4
13
94
5
53
80
20
0
0
0.72

Tables:   1   2   3   4   

The End!