Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.04
Please cite: G. Benson, "Tandem repeats finder: a program to analyze DNA sequences" Nucleic Acid Research(1999) Vol. 27, No. 2, pp. 573-580. Sequence: scaffold393 Parameters: 2 7 7 80 10 50 500 Length: 1263635

Tables:   1   2   3   4   

This is table  4  of  4  ( 399 repeats found )
Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1067216--1067247
16
2.0
16
93
0
55
31
21
12
34
1.91
1067861--1068067
114
1.8
114
84
4
283
28
19
11
40
1.86
1079869--1079947
32
2.4
32
93
2
140
27
29
17
25
1.98
1082565--1082667
36
2.9
36
97
0
188
25
21
27
26
1.99
1100350--1100376
2
13.5
2
100
0
54
48
0
51
0
1.00
1112302--1112349
20
2.4
20
85
3
69
35
14
6
43
1.71
1113061--1114029
172
5.6
172
94
1
1656
36
16
19
28
1.93
1114043--1114112
8
8.8
8
82
0
86
32
42
24
0
1.55
1114043--1114112
16
4.4
16
94
0
113
32
42
24
0
1.55
1115689--1115739
2
25.5
2
100
0
102
50
0
49
0
1.00
1120950--1120986
19
2.0
18
100
0
65
32
10
32
21
1.88
1132962--1133171
42
5.0
42
97
0
384
31
11
18
38
1.86
1133029--1133099
25
3.2
25
62
29
68
32
14
16
36
1.89
1133299--1133335
11
3.4
11
96
0
65
62
0
10
27
1.28
1134540--1134583
22
2.0
22
90
0
70
40
13
2
43
1.57
1138017--1138056
19
2.1
19
100
0
80
40
10
15
35
1.80
1139519--1139565
4
12.0
4
90
4
60
31
25
42
0
1.55
1150388--1151046
166
4.1
160
75
11
499
33
13
22
29
1.93
1152804--1152850
2
23.5
2
100
0
94
51
0
48
0
1.00
1158021--1158055
18
1.9
18
88
0
52
31
11
5
51
1.61
1161737--1161915
74
2.4
74
87
1
252
34
20
17
27
1.95
1165233--1165304
21
3.4
21
98
0
135
45
4
22
27
1.70
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1165332--1165404
21
3.5
21
100
0
146
42
15
12
30
1.83
1165394--1165457
21
3.0
21
68
4
58
37
17
6
39
1.75
1165243--1165475
42
5.6
42
76
5
161
41
11
13
33
1.80
1165452--1165520
21
3.3
21
87
0
102
40
7
17
34
1.77
1166092--1166185
21
4.2
21
83
12
125
28
22
5
43
1.75
1166168--1166293
42
3.0
42
79
6
119
40
9
15
34
1.80
1166234--1166311
21
3.8
21
93
1
131
43
5
21
29
1.74
1166232--1166320
21
4.3
21
91
1
128
43
4
20
31
1.71
1185038--1185160
34
3.8
32
76
8
124
35
18
10
34
1.86
1189406--1189431
12
2.2
12
100
0
52
30
15
0
53
1.42
1193436--1193478
2
21.5
2
81
9
52
46
4
2
46
1.36
1193951--1194048
45
2.2
44
96
3
187
14
19
22
43
1.87
1200304--1200476
89
1.9
89
100
0
346
35
12
8
43
1.73
1216814--1216860
2
23.5
2
100
0
94
0
48
0
51
1.00
1218060--1218102
21
2.0
21
86
8
61
37
20
11
30
1.89
1218342--1218512
21
8.1
21
78
0
162
36
15
13
35
1.86
1218402--1218534
42
3.2
42
83
2
133
36
15
12
35
1.85

Tables:   1   2   3   4   

The End!