Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.04

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold334
Parameters: 2 7 7 80 10 50 500
Length:  1116604

Tables:   1   2   3   4   5   6   

This is table  6  of  6  ( 617 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1067970--1068097
39
3.3
39
78
11
140
32
14
20
32
1.93
1067969--1068097
38
3.4
38
76
14
131
32
14
20
32
1.93
1075454--1075580
43
2.9
43
90
1
182
39
15
14
30
1.87
1075446--1075578
65
2.1
64
91
1
212
37
15
14
32
1.88
1075454--1075580
22
5.9
22
84
3
159
39
15
14
30
1.87
1080704--1080729
8
3.2
8
100
0
52
38
15
11
34
1.83
1082594--1082641
25
1.9
25
91
0
78
29
12
29
29
1.93
1085823--1085870
25
1.9
25
95
0
87
29
31
12
27
1.93
1087111--1087177
7
9.6
7
73
0
62
38
13
19
28
1.89
1087137--1087179
21
2.0
21
95
0
77
41
13
18
25
1.88
1087308--1087470
53
3.0
53
79
13
186
14
20
17
47
1.83
1087300--1087581
63
4.7
59
83
10
258
18
18
17
45
1.85
1087361--1087592
63
3.7
62
89
5
283
17
18
17
46
1.84
1087410--1087592
63
2.9
63
92
2
294
19
16
16
47
1.83
1087801--1087935
66
2.0
66
100
0
270
18
16
16
48
1.81
1109750--1109786
2
18.5
2
100
0
74
48
0
51
0
1.00
1113978--1114002
13
1.9
13
100
0
50
52
16
16
16
1.76

Tables:   1   2   3   4   5   6

The End!