Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.04

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold226
Parameters: 2 7 7 80 10 50 500
Length:  1071921

Tables:   1   2   3   

This is table  3  of  3  ( 262 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
961988--962026
18
2.1
19
95
4
71
46
10
5
38
1.60
967691--967733
2
21.0
2
95
4
77
2
48
0
48
1.14
975792--975817
12
2.2
12
100
0
52
57
7
7
26
1.54
998939--998992
24
2.2
24
93
0
90
29
11
16
42
1.83
1011311--1011343
17
1.9
17
88
11
50
42
12
6
39
1.67
1018946--1018978
17
2.0
17
88
5
50
51
6
15
27
1.66
1025659--1025684
1
26.0
1
100
0
52
100
0
0
0
0.00
1034794--1034826
14
2.4
14
95
5
59
90
0
3
6
0.52
1034791--1034844
19
2.7
20
80
5
65
83
7
1
7
0.88
1034809--1034856
12
3.8
12
81
8
51
83
6
0
10
0.81
1034793--1034830
7
5.4
7
84
12
51
89
0
2
7
0.57
1034794--1034856
14
4.8
13
82
7
56
84
4
1
9
0.84
1034808--1034856
25
1.9
25
87
4
71
83
6
0
10
0.80
1038332--1039735
66
21.1
64
72
12
719
25
20
19
34
1.96
1038332--1039732
65
21.0
65
71
12
765
25
20
19
34
1.96
1038349--1039442
201
5.5
198
74
11
647
25
20
19
35
1.95
1039718--1040133
66
6.3
66
77
13
423
32
21
19
26
1.97
1039718--1040140
132
3.2
130
84
9
572
32
21
19
26
1.97
1040482--1041010
166
3.2
165
89
2
778
26
24
16
33
1.96
1054416--1054464
15
3.0
17
76
11
57
38
12
18
30
1.87
1056748--1056779
11
2.9
11
100
0
64
28
37
18
15
1.92
1059405--1059441
19
2.0
19
89
5
58
43
0
16
40
1.48

Tables:   1   2   3

The End!