20150521_trimmed_2212_lane2_1000ppm_CTTGTA.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	20150521_trimmed_2212_lane2_1000ppm_CTTGTA.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	57867827
Sequences flagged as poor quality	0
Sequence length	1-51
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TTAGATC	4905	29.788969	45
CTAGATC	5480	28.179277	45
TAAGATC	5345	24.822496	45
ATAGATC	6470	18.88248	45
CAAGATC	17450	16.830708	45
CCTAGAT	3480	15.587162	45
ACTAGAT	4390	15.584283	45
ACAGATC	11085	14.680196	45
CTTAGAT	2985	14.214857	44
CTAAGAT	2935	14.126572	44
TCTAGAT	3280	12.7384205	45
TCAGATC	10040	12.655024	45
ACAAGAT	12540	12.294905	45
ATAAGAT	6515	11.813796	45
AAAGATC	8715	11.410911	45
ATTAGAT	7360	11.088223	45
CCTTAGA	2575	10.627574	45
CCAAGAT	11500	10.071029	45
ACTTAGA	2165	9.254421	45
CCTAAGA	2185	9.073054	43