Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.04

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: scaffold53
Parameters: 2 7 7 80 10 50 500
Length:  1214666

Tables:   1   2   3   4   

This is table  4  of  4  ( 373 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1170601--1170634
17
2.0
17
88
11
52
29
17
5
47
1.71
1172136--1172168
17
1.9
17
100
0
66
30
24
21
24
1.99
1173607--1173643
19
1.9
19
94
0
65
37
2
5
54
1.38
1176178--1176206
11
2.6
11
100
0
58
44
24
10
20
1.82
1176691--1176736
2
23.0
2
100
0
92
0
50
0
50
1.00
1187719--1187750
15
2.1
15
94
0
55
15
6
12
65
1.44
1189086--1189116
15
2.1
15
93
0
53
35
19
25
19
1.95
1190067--1190091
12
2.1
12
100
0
50
32
16
16
36
1.90
1193427--1193475
24
2.0
24
88
7
73
20
18
18
42
1.89
1196959--1196987
13
2.1
14
93
6
51
13
0
3
82
0.79
1203364--1203420
26
2.2
26
96
0
105
52
3
21
22
1.62
1212732--1212772
4
10.2
4
84
10
57
51
0
21
26
1.48
1212820--1212859
2
20.0
2
100
0
80
50
0
50
0
1.00

Tables:   1   2   3   4

The End!