context("scg") ## TODO: we only test that they run, not the results test_that("SCG functions work", { library(igraph) tree <- graph.tree(10, 3, "undirected") treeM <- get.adjacency(tree, sparse=TRUE) treeM2 <- get.adjacency(tree, sparse=FALSE) args <- list(ev=1, nt=3, mtype="symmetric", algo="exact_scg", semproj=TRUE, epairs=TRUE) do.call(scg, c(list(tree), args)) do.call(scg, c(list(treeM), args)) do.call(scg, c(list(treeM2), args)) args[["ev"]] <- 3 do.call(scg, c(list(tree), args)) do.call(scg, c(list(treeM), args)) do.call(scg, c(list(treeM2), args)) args[["ev"]] <- c(1,3) do.call(scg, c(list(tree), args)) do.call(scg, c(list(treeM), args)) do.call(scg, c(list(treeM2), args)) ############################### args <- list(ev=1, nt=2, mtype="stochastic", algo="exact_scg", semproj=TRUE, epairs=TRUE, stat.prob=TRUE) do.call(scg, c(list(tree), args)) do.call(scg, c(list(treeM), args)) do.call(scg, c(list(treeM2), args)) args[["ev"]] <- 3 do.call(scg, c(list(tree), args)) do.call(scg, c(list(treeM), args)) do.call(scg, c(list(treeM2), args)) args[["ev"]] <- c(1,3) do.call(scg, c(list(tree), args)) do.call(scg, c(list(treeM), args)) do.call(scg, c(list(treeM2), args)) ############################### args <- list(ev=1, nt=2, mtype="laplacian", algo="exact_scg", semproj=TRUE, epairs=TRUE) do.call(scg, c(list(tree), args)) do.call(scg, c(list(treeM), args)) do.call(scg, c(list(treeM2), args)) args[["ev"]] <- 3 do.call(scg, c(list(tree), args)) do.call(scg, c(list(treeM), args)) do.call(scg, c(list(treeM2), args)) args[["ev"]] <- c(1,3) do.call(scg, c(list(tree), args)) do.call(scg, c(list(treeM), args)) do.call(scg, c(list(treeM2), args)) })