Column1,Column2,Column3,Column4,Column5,Column6,Column7,Column8,Column9,Column10,Column11,Column12,Column13,Column14,Column15,Column16,Column17,Column18,Column1,Column2,Column3,Column4,Column5
C23732,methratio,CpG,2042,2043,0.556,+,.,.,C23732,GLEAN,mRNA,1939,2391,0.999372,-,.,CGI_10000148,,,,,
C29320,methratio,CpG,3556,3557,0.8,+,.,.,C29320,GLEAN,mRNA,1206,6434,0.544851,+,.,CGI_10000520,,,,,
C29320,methratio,CpG,3560,3561,0.8,+,.,.,C29320,GLEAN,mRNA,1206,6434,0.544851,+,.,CGI_10000520,,,,,
C30046,methratio,CpG,2334,2335,0.571,+,.,.,C30046,GLEAN,mRNA,202,6592,0.480335,+,.,CGI_10000591,CGI_10000591,Q71LX4,4E-69,Q71LX4,Talin-2
C34600,methratio,CpG,17433,17434,0.875,+,.,.,C34600,GLEAN,mRNA,8391,19305,0.999866,-,.,CGI_10001325,CGI_10001325,Q9P225,0,Q9P225,"Dynein heavy chain 2, axonemal"
C34600,methratio,CpG,16063,16064,0.667,+,.,.,C34600,GLEAN,mRNA,8391,19305,0.999866,-,.,CGI_10001325,CGI_10001325,Q9P225,0,Q9P225,"Dynein heavy chain 2, axonemal"
C35042,methratio,CpG,8537,8538,0.833,+,.,.,C35042,GLEAN,mRNA,1730,15534,0.391528,+,.,CGI_10001403,,,,,
C35042,methratio,CpG,8498,8499,0.739,+,.,.,C35042,GLEAN,mRNA,1730,15534,0.391528,+,.,CGI_10001403,,,,,
C35042,methratio,CpG,8510,8511,0.571,+,.,.,C35042,GLEAN,mRNA,1730,15534,0.391528,+,.,CGI_10001403,,,,,
scaffold1017,methratio,CpG,97766,97767,0.833,+,.,.,scaffold1017,GLEAN,mRNA,89381,134984,0.662353,+,.,CGI_10024982,CGI_10024982,P45844,0,P45844,ATP-binding cassette sub-family G member 1
scaffold102,methratio,CpG,510670,510671,0.5,+,.,.,scaffold102,GLEAN,mRNA,501859,537803,0.999676,-,.,CGI_10028439,CGI_10028439,Q03145,8E-46,Q03145,Ephrin type-A receptor 2
scaffold1103,methratio,CpG,36272,36273,0.833,+,.,.,scaffold1103,GLEAN,mRNA,24786,37142,0.791674,-,.,CGI_10004869,CGI_10004869,Q5RJY2,4E-19,Q5RJY2,G2/M phase-specific E3 ubiquitin-protein ligase
scaffold1177,methratio,CpG,80800,80801,0.8,+,.,.,scaffold1177,GLEAN,mRNA,74651,83816,0.937811,+,.,CGI_10003914,CGI_10003914,Q71LX4,4E-162,Q71LX4,Talin-2
scaffold1177,methratio,CpG,78853,78854,0.667,+,.,.,scaffold1177,GLEAN,mRNA,74651,83816,0.937811,+,.,CGI_10003914,CGI_10003914,Q71LX4,4E-162,Q71LX4,Talin-2
scaffold1177,methratio,CpG,80671,80672,0.667,+,.,.,scaffold1177,GLEAN,mRNA,74651,83816,0.937811,+,.,CGI_10003914,CGI_10003914,Q71LX4,4E-162,Q71LX4,Talin-2
scaffold1177,methratio,CpG,80679,80680,0.6,+,.,.,scaffold1177,GLEAN,mRNA,74651,83816,0.937811,+,.,CGI_10003914,CGI_10003914,Q71LX4,4E-162,Q71LX4,Talin-2
scaffold1177,methratio,CpG,78847,78848,0.5,+,.,.,scaffold1177,GLEAN,mRNA,74651,83816,0.937811,+,.,CGI_10003914,CGI_10003914,Q71LX4,4E-162,Q71LX4,Talin-2
scaffold1179,methratio,CpG,939133,939134,0.5,+,.,.,scaffold1179,GLEAN,mRNA,936280,947260,0.224969,+,.,CGI_10027393,CGI_10027393,P97690,1E-32,P97690,Structural maintenance of chromosomes protein 3
scaffold1322,methratio,CpG,234800,234801,1,+,.,.,scaffold1322,GLEAN,mRNA,234644,241892,0.634119,-,.,CGI_10019471,CGI_10019471,P20241,1E-21,P20241,Neuroglian
scaffold1348,methratio,CpG,7013,7014,0.64,+,.,.,scaffold1348,GLEAN,mRNA,6931,7302,1,-,.,CGI_10008057,CGI_10008057,P19374,4E-59,P19374,Histone H2B
scaffold1348,methratio,CpG,6999,7000,0.588,+,.,.,scaffold1348,GLEAN,mRNA,6931,7302,1,-,.,CGI_10008057,CGI_10008057,P19374,4E-59,P19374,Histone H2B
scaffold1372,methratio,CpG,248196,248197,1,+,.,.,scaffold1372,GLEAN,mRNA,201385,266403,0.568164,+,.,CGI_10015666,CGI_10015666,Q2PZL6,0,Q2PZL6,Protocadherin Fat 4
scaffold1391,methratio,CpG,388145,388146,1,+,.,.,scaffold1391,GLEAN,mRNA,350298,393065,0.79473,+,.,CGI_10016948,CGI_10016948,Q80ZA4,0,Q80ZA4,Fibrocystin-L
scaffold1427,methratio,CpG,59197,59198,0.667,+,.,.,scaffold1427,GLEAN,mRNA,53677,60534,0.584287,-,.,CGI_10005228,CGI_10005228,P40724,5E-21,P40724,ATP-dependent DNA helicase recQ
scaffold1427,methratio,CpG,59134,59135,0.556,+,.,.,scaffold1427,GLEAN,mRNA,53677,60534,0.584287,-,.,CGI_10005228,CGI_10005228,P40724,5E-21,P40724,ATP-dependent DNA helicase recQ
scaffold149,methratio,CpG,818566,818567,0.714,+,.,.,scaffold149,GLEAN,mRNA,801158,838837,0.367052,-,.,CGI_10025323,CGI_10025323,Q92624,9E-23,Q92624,Amyloid protein-binding protein 2
scaffold149,methratio,CpG,818566,818567,0.714,+,.,.,scaffold149,GLEAN,mRNA,816960,819517,1,+,.,CGI_10025324,CGI_10025324,O88696,2E-85,O88696,"Putative ATP-dependent Clp protease proteolytic subunit, mitochondrial"
scaffold1493,methratio,CpG,39432,39433,0.667,+,.,.,scaffold1493,GLEAN,mRNA,34742,42344,0.999351,+,.,CGI_10006738,CGI_10006738,Q6P4W7,3E-97,Q6P4W7,Synembryn-A
scaffold1518,methratio,CpG,150196,150197,0.8,+,.,.,scaffold1518,GLEAN,mRNA,145398,153173,0.728788,-,.,CGI_10017795,CGI_10017795,Q8BJ48,7E-85,Q8BJ48,N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase
scaffold1546,methratio,CpG,193183,193184,0.519,+,.,.,scaffold1546,GLEAN,mRNA,182221,209655,0.988067,+,.,CGI_10010755,CGI_10010755,Q9GUM2,3E-29,Q9GUM2,"Beta-1,4-N-acetylgalactosaminyltransferase bre-4"
scaffold1554,methratio,CpG,422822,422823,0.833,+,.,.,scaffold1554,GLEAN,mRNA,398282,424620,0.924957,+,.,CGI_10017370,CGI_10017370,P84022,0,P84022,Mothers against decapentaplegic homolog 3
scaffold156,methratio,CpG,25560,25561,0.5,+,.,.,scaffold156,GLEAN,mRNA,14763,25823,0.782343,+,.,CGI_10026471,,,,,
scaffold1572,methratio,CpG,105837,105838,0.778,+,.,.,scaffold1572,GLEAN,mRNA,98792,115435,1,+,.,CGI_10007819,CGI_10007819,Q5ND34,6E-126,Q5ND34,WD repeat-containing protein 81
scaffold1589,methratio,CpG,406844,406845,1,+,.,.,scaffold1589,GLEAN,mRNA,396798,423094,0.722572,-,.,CGI_10024116,CGI_10024116,Q66IV1,4E-158,Q66IV1,Myelin gene regulatory factor
scaffold160,methratio,CpG,248368,248369,0.7,+,.,.,scaffold160,GLEAN,mRNA,238940,259225,0.993906,-,.,CGI_10020581,CGI_10020581,Q6UVM3,0,Q6UVM3,Potassium channel subfamily T member 2
scaffold1785,methratio,CpG,255053,255054,0.833,+,.,.,scaffold1785,GLEAN,mRNA,253119,260355,1,-,.,CGI_10024370,CGI_10024370,Q9BX10,0,Q9BX10,GTP-binding protein 2
scaffold1785,methratio,CpG,255053,255054,0.833,+,.,.,scaffold1785,GLEAN,mRNA,242131,274696,0.526332,+,.,CGI_10024369,CGI_10024369,Q6ZMV9,0,Q6ZMV9,Kinesin-like protein KIF6
scaffold1834,methratio,CpG,190387,190388,0.714,+,.,.,scaffold1834,GLEAN,mRNA,187623,216470,0.374762,+,.,CGI_10016658,CGI_10016658,Q9R1X4,0,Q9R1X4,Protein timeless homolog
scaffold1838,methratio,CpG,54044,54045,1,+,.,.,scaffold1838,GLEAN,mRNA,45154,55054,0.999363,+,.,CGI_10014240,CGI_10014240,Q8K135,3E-141,Q8K135,Dyslexia-associated protein KIAA0319-like protein
scaffold1881,methratio,CpG,44295,44296,0.571,+,.,.,scaffold1881,GLEAN,mRNA,39220,49380,0.934445,-,.,CGI_10006129,CGI_10006129,Q5FVL6,9E-68,Q5FVL6,Tetraspanin-13
scaffold1892,methratio,CpG,275764,275765,0.6,+,.,.,scaffold1892,GLEAN,mRNA,215307,285710,0.920896,-,.,CGI_10011321,CGI_10011321,Q9UPS8,1E-65,Q9UPS8,Ankyrin repeat domain-containing protein 26
scaffold230,methratio,CpG,52868,52869,1,+,.,.,scaffold230,GLEAN,mRNA,41195,58546,0.998823,-,.,CGI_10011249,CGI_10011249,Q32PH0,5E-178,Q32PH0,Trafficking protein particle complex subunit 9
scaffold241,methratio,CpG,20131,20132,0.7,+,.,.,scaffold241,GLEAN,mRNA,14170,22719,0.325403,+,.,CGI_10025082,,,,,
scaffold241,methratio,CpG,20135,20136,0.636,+,.,.,scaffold241,GLEAN,mRNA,14170,22719,0.325403,+,.,CGI_10025082,,,,,
scaffold267,methratio,CpG,505351,505352,0.5,+,.,.,scaffold267,GLEAN,mRNA,504693,505362,1,+,.,CGI_10018318,,,,,
scaffold317,methratio,CpG,15819,15820,0.667,+,.,.,scaffold317,GLEAN,mRNA,7090,24632,0.990181,+,.,CGI_10019337,,,,,
scaffold340,methratio,CpG,153913,153914,0.667,+,.,.,scaffold340,GLEAN,mRNA,145168,157161,0.839591,-,.,CGI_10011099,,,,,
scaffold361,methratio,CpG,311938,311939,0.667,+,.,.,scaffold361,GLEAN,mRNA,302353,313236,0.434065,-,.,CGI_10020857,CGI_10020857,P08478,2E-69,P08478,Peptidyl-glycine alpha-amidating monooxygenase A
scaffold37128,methratio,CpG,5897,5898,0.6,+,.,.,scaffold37128,GLEAN,mRNA,3059,12731,1,+,.,CGI_10002289,CGI_10002289,Q9Y490,6E-69,Q9Y490,Talin-1
scaffold37178,methratio,CpG,3680,3681,0.917,+,.,.,scaffold37178,GLEAN,mRNA,3530,5404,0.995199,+,.,CGI_10002304,,,,,
scaffold37178,methratio,CpG,3684,3685,0.917,+,.,.,scaffold37178,GLEAN,mRNA,3530,5404,0.995199,+,.,CGI_10002304,,,,,
scaffold37178,methratio,CpG,3905,3906,0.857,+,.,.,scaffold37178,GLEAN,mRNA,3530,5404,0.995199,+,.,CGI_10002304,,,,,
scaffold37178,methratio,CpG,3933,3934,0.857,+,.,.,scaffold37178,GLEAN,mRNA,3530,5404,0.995199,+,.,CGI_10002304,,,,,
scaffold37178,methratio,CpG,3961,3962,0.833,+,.,.,scaffold37178,GLEAN,mRNA,3530,5404,0.995199,+,.,CGI_10002304,,,,,
scaffold37178,methratio,CpG,3703,3704,0.692,+,.,.,scaffold37178,GLEAN,mRNA,3530,5404,0.995199,+,.,CGI_10002304,,,,,
scaffold37178,methratio,CpG,3786,3787,0.5,+,.,.,scaffold37178,GLEAN,mRNA,3530,5404,0.995199,+,.,CGI_10002304,,,,,
scaffold37178,methratio,CpG,4048,4049,0.5,+,.,.,scaffold37178,GLEAN,mRNA,3530,5404,0.995199,+,.,CGI_10002304,,,,,
scaffold37540,methratio,CpG,40027,40028,0.833,+,.,.,scaffold37540,GLEAN,mRNA,33950,40566,0.794507,-,.,CGI_10002407,CGI_10002407,A8K0R7,9E-13,A8K0R7,Zinc finger protein 839
scaffold38306,methratio,CpG,50870,50871,0.857,+,.,.,scaffold38306,GLEAN,mRNA,41043,52785,0.996569,+,.,CGI_10002714,,,,,
scaffold38674,methratio,CpG,12473,12474,0.833,+,.,.,scaffold38674,GLEAN,mRNA,11281,17360,1,-,.,CGI_10002899,CGI_10002899,Q5XIJ8,2E-138,.,.
scaffold4,methratio,CpG,86546,86547,1,+,.,.,scaffold4,GLEAN,mRNA,85995,96261,0.999414,-,.,CGI_10021164,CGI_10021164,Q9JIA7,4E-76,Q9JIA7,Sphingosine kinase 2
scaffold40,methratio,CpG,135112,135113,0.571,+,.,.,scaffold40,GLEAN,mRNA,134847,145601,1,-,.,CGI_10015103,,,,,
scaffold40184,methratio,CpG,79179,79180,0.833,+,.,.,scaffold40184,GLEAN,mRNA,75537,80014,0.99705,-,.,CGI_10003948,,,,,
scaffold40598,methratio,CpG,11628,11629,0.5,+,.,.,scaffold40598,GLEAN,mRNA,11098,12519,0.794507,-,.,CGI_10004246,,,,,
scaffold406,methratio,CpG,608542,608543,0.889,+,.,.,scaffold406,GLEAN,mRNA,608367,608735,0.968462,-,.,CGI_10023861,,,,,
scaffold413,methratio,CpG,25566,25567,0.889,+,.,.,scaffold413,GLEAN,mRNA,19519,43833,0.497504,-,.,CGI_10022792,CGI_10022792,Q9P225,0,Q9P225,"Dynein heavy chain 2, axonemal"
scaffold413,methratio,CpG,15973,15974,0.583,+,.,.,scaffold413,GLEAN,mRNA,9716,19114,0.940957,-,.,CGI_10022791,CGI_10022791,Q9P225,0,Q9P225,"Dynein heavy chain 2, axonemal"
scaffold41550,methratio,CpG,10928,10929,0.714,+,.,.,scaffold41550,GLEAN,mRNA,3914,12956,0.999612,+,.,CGI_10005235,,,,,
scaffold41588,methratio,CpG,68322,68323,0.6,+,.,.,scaffold41588,GLEAN,mRNA,48446,70491,0.998791,-,.,CGI_10005255,CGI_10005255,A6H8Z2,6E-54,.,.
scaffold42,methratio,CpG,465358,465359,1,+,.,.,scaffold42,GLEAN,mRNA,463969,484388,0.999675,-,.,CGI_10018921,CGI_10018921,B4M5X4,9E-160,B4M5X4,Protein kibra
scaffold42062,methratio,CpG,87224,87225,1,+,.,.,scaffold42062,GLEAN,mRNA,76819,88287,1,-,.,CGI_10006065,CGI_10006065,Q8VHI3,7E-158,Q8VHI3,GDP-fucose protein O-fucosyltransferase 2
scaffold42890,methratio,CpG,112622,112623,0.857,+,.,.,scaffold42890,GLEAN,mRNA,109231,127553,0.999676,-,.,CGI_10008042,CGI_10008042,Q8MIB3,0,Q8MIB3,ATP-binding cassette sub-family G member 2
scaffold43562,methratio,CpG,25900,25901,0.571,+,.,.,scaffold43562,GLEAN,mRNA,921,63783,0.694747,+,.,CGI_10011029,CGI_10011029,Q6V0I7,0,Q6V0I7,Protocadherin Fat 4
scaffold43964,methratio,CpG,283148,283149,0.571,+,.,.,scaffold43964,GLEAN,mRNA,268452,286873,0.52614,+,.,CGI_10014654,,,,,
scaffold44064,methratio,CpG,121944,121945,1,+,.,.,scaffold44064,GLEAN,mRNA,120842,136443,0.996612,-,.,CGI_10016756,CGI_10016756,Q6IDD9,9E-112,Q6IDD9,Sterile alpha and TIR motif-containing protein 1
scaffold448,methratio,CpG,438916,438917,1,+,.,.,scaffold448,GLEAN,mRNA,438345,447382,0.993907,+,.,CGI_10024948,CGI_10024948,P0C6F1,1E-63,P0C6F1,"Dynein heavy chain 2, axonemal"
scaffold448,methratio,CpG,438921,438922,0.833,+,.,.,scaffold448,GLEAN,mRNA,438345,447382,0.993907,+,.,CGI_10024948,CGI_10024948,P0C6F1,1E-63,P0C6F1,"Dynein heavy chain 2, axonemal"
scaffold448,methratio,CpG,423533,423534,0.667,+,.,.,scaffold448,GLEAN,mRNA,418684,429075,0.548785,+,.,CGI_10024944,CGI_10024944,Q9P225,0,Q9P225,"Dynein heavy chain 2, axonemal"
scaffold448,methratio,CpG,439679,439680,0.667,+,.,.,scaffold448,GLEAN,mRNA,438345,447382,0.993907,+,.,CGI_10024948,CGI_10024948,P0C6F1,1E-63,P0C6F1,"Dynein heavy chain 2, axonemal"
scaffold448,methratio,CpG,423617,423618,0.5,+,.,.,scaffold448,GLEAN,mRNA,418684,429075,0.548785,+,.,CGI_10024944,CGI_10024944,Q9P225,0,Q9P225,"Dynein heavy chain 2, axonemal"
scaffold485,methratio,CpG,57005,57006,0.5,+,.,.,scaffold485,GLEAN,mRNA,50911,65152,1,-,.,CGI_10024137,CGI_10024137,A2A5Z6,0,A2A5Z6,E3 ubiquitin-protein ligase SMURF2
scaffold501,methratio,CpG,577998,577999,0.6,+,.,.,scaffold501,GLEAN,mRNA,575399,580307,0.882009,-,.,CGI_10027527,CGI_10027527,P54939,2E-18,P54939,Talin-1
scaffold546,methratio,CpG,85796,85797,0.667,+,.,.,scaffold546,GLEAN,mRNA,71049,119321,0.426319,-,.,CGI_10020993,CGI_10020993,Q9HAU5,0,Q9HAU5,Regulator of nonsense transcripts 2
scaffold586,methratio,CpG,200059,200060,0.5,+,.,.,scaffold586,GLEAN,mRNA,198053,203234,0.776736,+,.,CGI_10018002,,,,,
scaffold589,methratio,CpG,32849,32850,0.667,+,.,.,scaffold589,GLEAN,mRNA,32647,33333,0.747146,-,.,CGI_10003090,,,,,
scaffold589,methratio,CpG,32988,32989,0.571,+,.,.,scaffold589,GLEAN,mRNA,32647,33333,0.747146,-,.,CGI_10003090,,,,,
scaffold589,methratio,CpG,32995,32996,0.571,+,.,.,scaffold589,GLEAN,mRNA,32647,33333,0.747146,-,.,CGI_10003090,,,,,
scaffold589,methratio,CpG,33074,33075,0.5,+,.,.,scaffold589,GLEAN,mRNA,32647,33333,0.747146,-,.,CGI_10003090,,,,,
scaffold589,methratio,CpG,58233,58234,0.5,+,.,.,scaffold589,GLEAN,mRNA,58019,58354,0.618241,-,.,CGI_10003091,,,,,
scaffold589,methratio,CpG,58263,58264,0.5,+,.,.,scaffold589,GLEAN,mRNA,58019,58354,0.618241,-,.,CGI_10003091,,,,,
scaffold660,methratio,CpG,65483,65484,0.833,+,.,.,scaffold660,GLEAN,mRNA,36878,91372,0.840094,-,.,CGI_10013748,CGI_10013748,Q9IBG7,0,Q9IBG7,Kielin/chordin-like protein
scaffold787,methratio,CpG,218160,218161,0.667,+,.,.,scaffold787,GLEAN,mRNA,211780,224295,0.42091,+,.,CGI_10011649,CGI_10011649,Q96AY4,2E-13,Q96AY4,Tetratricopeptide repeat protein 28
scaffold787,methratio,CpG,138423,138424,0.5,+,.,.,scaffold787,GLEAN,mRNA,127421,141413,0.552181,-,.,CGI_10011646,,,,,
scaffold837,methratio,CpG,160336,160337,0.833,+,.,.,scaffold837,GLEAN,mRNA,123531,163524,0.330154,-,.,CGI_10006872,CGI_10006872,O70157,0,O70157,DNA topoisomerase 3-alpha
scaffold86,methratio,CpG,204549,204550,0.562,+,.,.,scaffold86,GLEAN,mRNA,200665,223969,0.897284,+,.,CGI_10028142,,,,,
scaffold86,methratio,CpG,204526,204527,0.5,+,.,.,scaffold86,GLEAN,mRNA,200665,223969,0.897284,+,.,CGI_10028142,,,,,
scaffold948,methratio,CpG,258913,258914,1,+,.,.,scaffold948,GLEAN,mRNA,219200,300594,0.0278138,+,.,CGI_10020015,CGI_10020015,Q9C0G6,0,Q9C0G6,"Dynein heavy chain 6, axonemal"
scaffold992,methratio,CpG,61531,61532,0.5,+,.,.,scaffold992,GLEAN,mRNA,58800,81897,0.654733,-,.,CGI_10007507,CGI_10007507,Q8K1X1,5E-173,Q8K1X1,WD repeat-containing protein 11