7 28 2014 Temp Data Manipulation

I attempted to manipulate the temp data today. I'm running into the same sed error on the windows computers that jammed me up back in the winter. I can edit pretty much anything and produce an out file but for some reason if I try to eliminate the quotation marks using sed so that I can have clean column heading, sed will not produce an outfile or even change the file its working on. It shows the edit in the notebook but then doesn't create the actual change in the file. Does anyone know how to solve this other than bouncing back and forth between my linux computer and desktop.

See attached notebook

7 25 2014 Fidalgo repro check

Anacortes wa

Mid 60s to mid 70s sunny

Performed the anesthesia sop with insulation on treatment tub and a tarp on the Pretreatment and recovery tubs. Treatment less effective than normal but still had an acceptable amount of Gaping oysters. Found many grey sick animals in the south pop.

Numbers as follow :

Temps in c
Pretreatment
Initial.          9
45.             11
1.5.             11

Treatment.
Initial.        11
45.           11
1.5.            11
2.25.         11

Recovery
Initial.         11
45.            12
1.5.            14

Salinity in ppt
Pretreatment.      27
Treatment.          63
Recovery.           25

Brood collection
2N9-12
Brood.      0
Gaping.     55
Dead.        0
Closed.      45

2H1-4
Brood.       2
Gaping.      50
Dead.         0
Closed.      36

Brooders
#     size.   Sick
1.       20.      W
2.      22.       W

2S5-8
Brood.     6
Gaping.    72
Dead.       0
Closed.    25

Brooders
#     size.    Sick
1.       29.      Grey
2.      25.      Grey
3.      30.      Grey
4.      30.      W
5.      32.      W
6.      31.       Grey

Oyster below calipers closed. Oysters between calipers and label tube brooders.

7 24 2014. Oyster bay repro check

Oyster bay wa

High 60s to low 70s partly cloudy

Performed the anesthesia sop with insulation on treatment tub and a tarp on the Pretreatment and recovery tubs. Brooding back to normal with most brooders in southern pop, and equal numbers between north and dabob. Also crab fresh cleaning salt water lines used their water for Pretreatment but not for recovery because pump was shut down.

Numbers as follow
Temps in c

Pretreatment
Initial.    15
45.        15
1.5.        15

Treatment
Initial.    12
45.        12
1.5.        12
2.25.     13

Recovery
Initial.    13
45.        13
1.5.        14

Brood collection

1S1-4
Brood.      8
Gaping.     75
Dead.        4
Closed.     7

Brooders
#    size.    Sick
1.      24.      W
2.     34.       W
3.     30.       W
4.     30.      W
5.     30.      W
6.     25.      W
7.     26.      W
8.     27.       W

1N9-12
Brood.       3
Gaping.     68
Dead.        0
Closed.      10

Brooders
#     size.     Sick
1.      33.        W
2.     28.        W
3.     30.        W

1H9-12
Brood.     4
Gaping.    72
Dead.       4
Closed.    6

Brooders
#      size.      Sick
1.        25.        W
2.       26.        W
3.       28.        W
4.       25.        W.    No sample.

Also pics are of whole tray. Brooders between tube and calipers or bag. Closed same time outside of brooders. Rest are gapers.

7 23 14 Manchester Repro Survey

Manchester WA

Hi 50's to mid 60's Rainy, overcast

Participants: Joseph Stevick and Jake Heare

Performed the anesthesia sop with insulation on the treatment tub and tarp on the pretreatment/recovery tubs. No ice blocks because of the cloudy cool conditions. Found a few brooders in the Southern pop and one in the Dabob pop. Very middle of the road spawning.

Numbers as follow

Temp in C

Pretreatment
initial          8
45 min       9
1.5 hr        8

Treatment
Initial         8
45 min       9
1.5 hr        8
2.25  hr     8

Recovery
Initial        8
45 min      8
1.5 hr       8

Salinity in ppt

Pretreatment    27
Treatment        70
Recovery         28

Brood collection

4H5-8
Brood   1
Gaping  67
dead      7
closed    9

brooders
#     size   sick
1     15     w

4S1-4
Brood   2
Gaping  59
Dead     1
closed    6

Brooders
#    size   sick
1    27     w
2    23     w

4N5-8
Brood    0
Gaping   60
Dead     10
Closed   9

Also took pictures of the entire population. In the pics, the tile with the caliper and label tube are the closed animals except for the animals that are between the tube and calipers which were brooders.

7 18 2014 fidalgo bay repro check

Anacortes, WA

Mid 60s to mid 70s

Participants: alicia Godersky and Jake heare

Performed anesthesia sop with insulation on treatment tub.  Found brooders in only the dabob pop. It seems that they spawn later in the season but in smaller number. We will see in the coming weeks. Also treatment was surprisingly ineffective with no discernable reason. Water was calm. Temps were stable. No movement while in tubs. Full treatment strength and time.  Hopefully it was a fluke.

Numbers as follow:

Temps in c
Pretreatment
Initial.     10
45.         11
1.5.         11

Treatment
Initial.   10
45.       10
1.5.       11
2.25.     11

Recovery
Initial.      10
45.          11
1.5.          12

Salinity in ppt
Pretreatment.       28
Treatment.           66
Recovery.            28

Brood collection

2S1-4
Brood.      0
Gaping.     67
Dead.        0
Closed.     30

2H9-12
Brood.      2
Gaping.    32
Dead.       0
Closed.     50

Brooders
#     size.     Sick
1.       19.        W
2.      20.       W

2N13-16
Brood.     0
Gaping.    68
Dead.       0
Closed.    40

7 17 2014 oyster bay repro

Oyster bay

High 60s to high 70s

Participants:  alicia Godersky and Jake heare

Performed anesthesia sop with insulation on treatment and tarp with ice blocks on recovery tubs. Very heavy mussel set on all trays and oysters. Possibly causing spawning issues. Only one population had brooders which is very different than in previous weeks. The one pop was the dabob pop with 5 brooders, one of which looked like aborted spawn.

Numbers as follow.

Temps in c
Pretreatment
Initial.   16
45.      18
1.5.       18

Treatment
Initial.     13
45.         14
1.5.         14
2.25.       14

Recovery
Initial.      16
45.          16
1.5.          17

Salinity in ppt
Pretreatment.       24
Treatment.           66
Recovery.            25

Brood collection
1S13-16.        
Brood.     0
Gaping.     75
Dead.       1
Closed.     2

1N5-8
Brood.      0
Gaping.     48
Dead.        1
Closed.      1

1H1-4
Brood.      5. 
Gaping.     68
Dead.        6
Closed.      1

Brooders
#     size.    Sick
1.       30.      W
2.       20.     W
3.       26.      W
4.       26.      W
5.       27.      W. Possibly abort spawn.

7 16 2014 Manchester Repro Check

Manchester WA

Low 70s to Mid 80s

Participants: Alicia Godersky and Jake Heare

Performed the anesthesia SOP with insulation and ice blocks on the treatment group and tarp over the recovery and pretreatment tubs. Finally found multiple brooders in one population. If you can guess the pop, you can consider yourself an Oly Whisperer. The brooding animals were also much smaller than expected. Half were less than 20 mm which is quite odd.  Also temps fluxed on the tubs on the dock even with replacing water, the combination of sun and no breeze just baked the docks.

Numbers as follow:

Temps in C
Pretreatment
Initial     10
45         12
1.5        13

Treatment
Initial      12
45          13
1.5         12
2.25       11

Recovery
Initial      12
45          14
1.5         15


Salinity in ppt
Pretreatment      26
Treatment          66
Recovery           25


Brood Collection
4S5-8
Brood    3
Gaping   59
Dead      12
Closed   12

Brooders
#     size     sick
1      22      w
2      16      w
3      20      w

4H13-16
Brood     1
Gaping    56
Dead       8
Closed    17

Brooders
#     size    sick
1      17     W

4N13-16
Brood     0
Gaping    61
Dead       6
Closed    8