| A | B | C | D | E | F | G | H | I | J | K | L | M | N | O | P | Q | R | S | T | U | V | W | X | Y | Z | AA | |
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1 | column | row | label | sample_type | common_name | scientific | tags | ||||||||||||||||||||
2 | 1 | 1 | 1 | O. lurida from 2017 temp/OA parental exposure trial - multiple tissue collected after ~50day OA exposure (on 4/13/2017). South Sound F2 population ("K"), Box 1/2 (Laura) | tissue | olympia oyster | Ostrea lurida | ctenidia, mantle, adductor | |||||||||||||||||||
3 | 1 | 1 | 2 | O. lurida from 2017 temp/OA parental exposure trial - multiple tissue collected after ~50day OA exposure (on 4/13/2017). South Sound F2 population ("K"), Box 2/2 (Laura) | tissue | olympia oyster | Ostrea lurida | ctenidia, mantle, adductor | |||||||||||||||||||
4 | 1 | 1 | 3 | grace Crandall's samples from maristone, sea stars, 7.6.22 | |||||||||||||||||||||||
5 | 1 | 1 | 4 | Bay & Sea Scallop Project | scallop | ||||||||||||||||||||||
6 | 1 | 1 | 5 | Olivia's c. gigas d-hinge larvae from morpholino trial, maturation control project | RNA | pacific oyster | Crassostrea gigas | larvae | |||||||||||||||||||
7 | 1 | 2 | 1 | Whole body juvenile Olympia Oyster, after acute OA shock, 2018-06-01, box 1/3 (Laura) | tissue | olympia oyster | Ostrea lurida | ||||||||||||||||||||
8 | 1 | 2 | 2 | Whole body juvenile Olympia Oyster, after acute OA shock, 2018-06-01, box 2/3 (Laura) | tissue | olympia oyster | Ostrea lurida | ||||||||||||||||||||
9 | 1 | 2 | 3 | Whole body juvenile Olympia Oyster, after acute OA shock, 2018-06-01, box 3/3 (Laura) | tissue | olympia oyster | Ostrea lurida | ||||||||||||||||||||
10 | 1 | 2 | 4 | OA RNA Samples (round 1) (Alanna) | RNA | olympia oyster | Ostrea lurida | ||||||||||||||||||||
11 | 1 | 2 | 5 | OA RNA Samples (round 2) (Alanna) | RNA | olympia oyster | Ostrea lurida | ||||||||||||||||||||
12 | 1 | 3 | 1 | Geoduck hemolymph samples for Emma, 9.9.2016, GAC | hemolymph | pacific geoduck | Panopea generosa | gonad, reproduction | |||||||||||||||||||
13 | 1 | 3 | 2 | O. lurida from 2017 temp/OA parental exposure trial - MANTLE tissue collected after ~50day OA exposure (on 4/8/2017). Fidalgo Bay, Hood Canal, and South Sound populations, Box 1/2 (Laura) | tissue | olympia oyster | Ostrea lurida | mantle | |||||||||||||||||||
14 | 1 | 3 | 3 | O. lurida from 2017 temp/OA parental exposure trial - MANTLE tissue collected after ~50day OA exposure (on 4/8/2017). Fidalgo Bay, Hood Canal, and South Sound populations, Box 2/2 (Laura) | tissue | olympia oyster | Ostrea lurida | mantle | |||||||||||||||||||
15 | 1 | 3 | 4 | O. lurida from 2017 temp/OA parental exposure trial - CTENIDIA tissue collected after ~50day OA exposure (on 4/8/2017). Fidalgo Bay, Hood Canal, and South Sound populations, Box 1/2 (Laura) | tissue | olympia oyster | Ostrea lurida | ctenidia | |||||||||||||||||||
16 | 1 | 3 | 5 | O. lurida from 2017 temp/OA parental exposure trial - CTENIDIA tissue collected after ~50day OA exposure (on 4/8/2017). Fidalgo Bay, Hood Canal, and South Sound populations, Box 2/2 (Laura) | tissue | olympia oyster | Ostrea lurida | ctenidia | |||||||||||||||||||
17 | 1 | 4 | 1 | O. lurida larvae from 2017 temp/OA parental exposure carryover effects. Box 1 of 2 (Laura) | larvae | olympia oyster | Ostrea lurida | larvae, pooled | |||||||||||||||||||
18 | 1 | 4 | 2 | O. lurida larvae from 2017 temp/OA parental exposure carryover effects. Box 2 of 2 (Laura) | larvae | olympia oyster | Ostrea lurida | larvae, pooled | |||||||||||||||||||
19 | 1 | 4 | 3 | O. lurida RNA isolated from larvae and gonad, 2017 temp/OA parental exposure carryover effects (Laura) | RNA | olympia oyster | Ostrea lurida | larvae, gonad | |||||||||||||||||||
20 | 1 | 4 | 4 | O. lurida ctenidia and larvae from 2017 temp/OA parental exposure carryover effects. Aliquots of 20 uL (split from other box). | DNAsed RNA | olympia oyster | Ostrea lurida | ctenidia | |||||||||||||||||||
21 | 1 | 4 | 5 | O. lurida ctenidia and larvae from 2017 temp/OA parental exposure carryover effects. Aliquots of 20 uL (split from other box). | DNAsed RNA | olympia oyster | Ostrea lurida | ctenidia | |||||||||||||||||||
22 | 2 | 1 | 1 | OA RNA Samples Dave species: Pinto Abalone | pinto abalone | Haliotis kamtschatkana | |||||||||||||||||||||
23 | 2 | 1 | 2 | coelomocytes in 300ul DNA/RNA Shield; pycno, pisaster, derm; PSC 617-; summer 2023; box 6; GC, MP, AG, AM | coelomocytes | sunflower sea star | Pycnopodia helianthoides; Pisaster ochraceus; D. imbricata | ||||||||||||||||||||
24 | 2 | 1 | 3 | Hard Clam Hemolymph in RNA Later Rec'd 5/5/10 SJW | hard clam | Mercenaria mercenaria | |||||||||||||||||||||
25 | 2 | 1 | 4 | C.gigas Tissues from Nisbet Oysters Rec'd 2/28/2018 | tissue | pacific oyster | Crassostrea gigas | triploid; ctenidia; gonad; mantle; adductor muscle; | |||||||||||||||||||
26 | 2 | 1 | 5 | pycno, derm, pisaster coelomocyte supernatant, PSCS 444-; summer 2023; MP, AG, GC | coelomocyte supernatant | sunflower sea star | Pycnopodia helianthoides; Pisaster ochraceus; D. imbricata | ||||||||||||||||||||
27 | 2 | 2 | 1 | Sam's geoduck samples 7/28/18 | geoduck | Panopea generosa | |||||||||||||||||||||
28 | 2 | 2 | 2 | Tanner crab Isolated RNA from Hemolymph; GAC; 04/26/2018 | RNA | Tanner crab | Chionoecetes bairdi | ||||||||||||||||||||
29 | 2 | 2 | 3 | pycno, derm, pisaster coelomocytes in 300ul shield; PSC 684-; summer 2023; PSC; box 7; MP, AG, GC | coelomocytes | sunflower sea star | Pycnopodia helianthoides | ||||||||||||||||||||
30 | 2 | 2 | 4 | Hard Clam Tissues Rec'd 9/2/10 From MBL | tissue | hard clam | Mercenaria mercenaria | ||||||||||||||||||||
31 | 2 | 2 | 5 | sswd summer 2023 experiments; coelmocyte (PSC) from P. helianthoides, P. ochraceus, O. imbricata; box 8; PSC 764; GC, AG, MP | coelomocytes | sunflower sea star | Pycnopodia helianthoides; Pisaster ochraceus; D. imbricata | ||||||||||||||||||||
32 | 2 | 3 | 1 | Shellfish RNA Box #7 | RNA | tanner crab | Chionoecetes bairdi | hemolymph; DNased | |||||||||||||||||||
33 | 2 | 3 | 2 | O. lurida visceral mass from 2018 Winter Temp/Food experiment (population = Mud Bay) | tissue - visceral mass (gonad, gut) | olympia oyster | Ostrea lurida | gonad, gut, hepatopancreas | |||||||||||||||||||
34 | 2 | 3 | 3 | O. lurida visceral mass from 2018 Winter Temp/Food experiment (population = Mud Bay) | tissue - visceral mass (gonad, gut) | olympia oyster | Ostrea lurida | gonad, gut, hepatopancreas | |||||||||||||||||||
35 | 2 | 3 | 4 | SSWD summer 2023 experiments; coelomocyte supernatant (PSCS) from P. helianthoides; P. ochraceus; D. imbricata; box 8; PSCS 527-; GC, AG, MP | coelomocyte supernatant | sunflower sea star | Pycnopodia helianthoides; Pisaster ochraceus; D. imbricata | ||||||||||||||||||||
36 | 2 | 3 | 5 | Shellfish RNA Box #8 | RNA | tanner crab; pacific geoduck | Chionoecetes bairdi; Panopea generosa | hemolymph; DNased | |||||||||||||||||||
37 | 2 | 4 | 1 | O. lurida larvae collected & frozen upon release from 2018 Winter Temp/Food experiment (population = Mud Bay) | larvae | olympia oyster | Ostrea lurida | larvae, pooled | |||||||||||||||||||
38 | 2 | 4 | 2 | O. lurida larvae collected & frozen upon release from 2018 Winter Temp/Food experiment (population = Mud Bay) | larvae | olympia oyster | Ostrea lurida | larvae, pooled | |||||||||||||||||||
39 | 2 | 4 | 3 | O. lurida larvae collected & frozen upon release from 2018 Winter Temp/Food experiment (population = Mud Bay) | larvae | olympia oyster | Ostrea lurida | larvae, pooled | |||||||||||||||||||
40 | 2 | 4 | 4 | O. lurida larvae collected & frozen upon release from 2018 Winter Temp/Food experiment (population = Mud Bay) | larvae | olympia oyster | Ostrea lurida | larvae, pooled | |||||||||||||||||||
41 | 2 | 4 | 5 | C.gigas, C.sikamea mantle from Marinelli Shellfish 10/30/2019 | tissue (mantle) | pacific oyster; kumamoto | Crassostrea gigas; Crassostrea sikamea | tissue; mantle | |||||||||||||||||||
42 | 3 | 1 | 1 | O. lurida from 2017 temp/OA parental exposure trial - ADDUCTOR tissue collected after ~50day OA exposure (on 4/8/2017). Fidalgo Bay, Hood Canal, and South Sound populations, Box 1/2 (Laura) | tissue | olympia oyster | Ostrea lurida | adductor | |||||||||||||||||||
43 | 3 | 1 | 2 | O. lurida from 2017 temp/OA parental exposure trial - ADDUCTOR tissue collected after ~50day OA exposure (on 4/8/2017). Fidalgo Bay, Hood Canal, and South Sound populations, Box 2/2 (Laura) | tissue | olympia oyster | Ostrea lurida | adductor | |||||||||||||||||||
44 | 3 | 1 | 3 | Copepod RNA | RNA | ||||||||||||||||||||||
45 | 3 | 1 | 4 | Illumina Library Oligos & Barcodes | |||||||||||||||||||||||
46 | 3 | 1 | 5 | pycno, derm, pissater coelomocyte supernatant; summer 2023; PSCS 675; box 10; PSCS | coelomocyte supernatant | sunflower sea star; ochre star; leather star | Pycnopodia helianthoides; Pisaster ochraceus; Dermasterias imbricata | ||||||||||||||||||||
47 | 3 | 2 | 1 | Herring RNA Box #1 | RNA | pacific herring | Clupea pallasii | ||||||||||||||||||||
48 | 3 | 2 | 2 | RNA isolation; geoduck 12/17 | RNA | pacific geoduck | Panopea generosa | Vitellogenin, RNA, hemolymph, hemocytes | |||||||||||||||||||
49 | 3 | 2 | 3 | C. bairdi hemolymph RNA eluted in TE; Zymo Quick DNA/RNA microprep Plus Kit; GAC; 01/14/2020 | RNA | tanner crab | Chionoecetes bairdi | hemolymph | |||||||||||||||||||
50 | 3 | 2 | 4 | Mytilus galloprovincialis mfp-3 knockdown siRNA | siRNA | mediterranean mussel | Mytilus galloprovincialis | ||||||||||||||||||||
51 | 3 | 2 | 5 | SB NB WB Juveniles 35x51 Dec 09 C.gigas Bioindicator | pacific oyster | Crassostrea gigas | |||||||||||||||||||||
52 | 3 | 3 | 1 | Vibrio Protein | proteins | Vibrio tubiashii | |||||||||||||||||||||
53 | 3 | 3 | 2 | EE2v2 T=0 + Day 7 (1.25.13) | |||||||||||||||||||||||
54 | 3 | 3 | 3 | C.gigas Field Samples Aug 2009 BB, LC, DH | pacific oyster | Crassostrea gigas | |||||||||||||||||||||
55 | 3 | 3 | 4 | C. gigas embryo samples 3/11/20 | tissue | pacific oyster | Crassostrea gigas | embryo | |||||||||||||||||||
56 | 3 | 3 | 5 | EE2v2 day 60#111-141 gonad, 160 gill | tissue | pacific oyster | Crassostrea gigas | ||||||||||||||||||||
57 | 3 | 4 | 1 | C.gigas Tissues - High pH from Maria Haws Rec'd 12/10/2019 | tissue | pacific oyster | Crassostrea gigas | adductor muscle;gill;gonad;mantle | |||||||||||||||||||
58 | 3 | 4 | 2 | C. bairdi extracted hemolymph RNA in RNAse-free H20; Box 2; 10/31/2019; GAC | RNA | tanner crab | Chionoecetes bairdi | ||||||||||||||||||||
59 | 3 | 4 | 3 | C.gigas Tissues - Low pH from Maria Haws Rec'd 12/10/2019 | tissue | pacific oyster | Crassostrea gigas | adductor muscle;gill;gonad;mantle | |||||||||||||||||||
60 | 3 | 4 | 4 | Juv: NB, SB, WB Adults: SB APBIL2010 | |||||||||||||||||||||||
61 | 3 | 4 | 5 | EE2v2 day 60 71-110 | |||||||||||||||||||||||
62 | 4 | 1 | 1 | EE2 Trial: Day 35 Samples Tanks 3 + 4 box 3 of 5 | pacific oyster | Crassostrea gigas | |||||||||||||||||||||
63 | 4 | 1 | 2 | EE2 Trial: Day 35 Samples Tanks 4 + 5 box 4 of 5 | pacific oyster | Crassostrea gigas | |||||||||||||||||||||
64 | 4 | 1 | 3 | EE2 Trial: Day 35 Samples Tanks 5 + 6 box 5 of 5 | pacific oyster | Crassostrea gigas | |||||||||||||||||||||
65 | 4 | 1 | 4 | EE2 Experiment T=0 tissue Samples / 2 week samples 5.16.12 MG | tissue | pacific oyster | Crassostrea gigas | ||||||||||||||||||||
66 | 4 | 1 | 5 | NOAA - Olympia oyster Box B | olympia oyster | Ostrea lurida | |||||||||||||||||||||
67 | 4 | 2 | 1 | NOAA - Olympia oyster Box C | olympia oyster | Ostrea lurida | |||||||||||||||||||||
68 | 4 | 2 | 2 | Sam's RNA Box #1 | RNA | ||||||||||||||||||||||
69 | 4 | 2 | 3 | NOAA - Oly Oyster - "A" | olympia oyster | Ostrea lurida | |||||||||||||||||||||
70 | 4 | 2 | 4 | EE2 Trial 2 week timepoint 5.30.12 MG Tissue: Gonad | tissue | pacific oyster | Crassostrea gigas | ||||||||||||||||||||
71 | 4 | 2 | 5 | Laura Spencer RNA Oly Larvae 20 µL aliquots DNASeq | RNA | olympia oyster | Ostrea lurida | ||||||||||||||||||||
72 | 4 | 3 | 1 | ||||||||||||||||||||||||
73 | 4 | 3 | 2 | Geoduck Juvs. 10/18/2019 Shelly | whole animal | pacific geoduck | Panopea generosa | end point samples | |||||||||||||||||||
74 | 4 | 3 | 3 | Respirometry Geoduck Juvs. + Geoduck Juvs 10/18/2019 Shelly | whole animal | pacific geoduck | Panopea generosa | end point samples | |||||||||||||||||||
75 | |||||||||||||||||||||||||||
76 | 4 | 3 | 5 | EE2 week 5 Tank 1-2 | pacific oyster | Crassostrea gigas | |||||||||||||||||||||
77 | 4 | 4 | 1 | USDA-SRGARP-gigas-carryover Box 2- 1 month samples | tissue | pacific oyster | Crassostrea gigas | ||||||||||||||||||||
78 | 4 | 4 | 2 | Laura: Olympia oyster DNased RNA, 2017 OA/T study, from ctenidia & larvae for QuantSeq | RNA | olympia oyster | Ostrea lurida | ||||||||||||||||||||
79 | 4 | 4 | 3 | Laura: Olympia oyster DNased RNA, 2017 OA/T study, from ctenidia & larvae for QuantSeq | RNA | olympia oyster | Ostrea lurida | ||||||||||||||||||||
80 | 4 | 4 | 4 | USDA-SRGARP-gigas-carryover Box 1; whole oyster tissue samples from poly(I:C) pilot | RNA | pacific oyster | Crassostrea Gigas | ||||||||||||||||||||
81 | 4 | 4 | 5 | Sam's RNA Box #2 | RNA | sockeye salmon | Onchorynchus nerka | brain;liver;gonad | |||||||||||||||||||
82 | 5 | 1 | 1 | ||||||||||||||||||||||||
83 | 5 | 1 | 2 | Sam's geoduck samples 20180807 | |||||||||||||||||||||||
84 | 5 | 1 | 3 | Sam's geoduck samples 20180813 | |||||||||||||||||||||||
85 | 5 | 1 | 4 | ||||||||||||||||||||||||
86 | 5 | 1 | 5 | O. orca archived Tissue from NWFSC; Emma 2/4/10 | |||||||||||||||||||||||
87 | 5 | 2 | 1 | Summer 2022 experiment | |||||||||||||||||||||||
88 | 5 | 2 | 2 | summer 2022 experiment | |||||||||||||||||||||||
89 | 5 | 2 | 3 | Dorothy's -80C Box | RNAzol homogenized mussel gill | mussel | gill;RNAzol | ||||||||||||||||||||
90 | 5 | 2 | 4 | USDA-SRGARP-gigas-carryover Box 1; whole oyster tissue samples from poly(I:C) pilot | whole animal tissue sample | Pacific oyster | Crassostrea gigas | i = injected, mgcl - anathesia control, e = emersion, | |||||||||||||||||||
91 | 5 | 2 | 5 | TL#1 pilot time course 10ng/mL E2 LH 12/18/13 media/RNA | media, RNA | ||||||||||||||||||||||
92 | 5 | 3 | 1 | Shelly Trigg 10-31-18 | hemolymph | pacific geoduck | Panopea generosa | ||||||||||||||||||||
93 | 5 | 3 | 2 | Geoduck Calcium Assay Samples 12-07-2018 | hemolymph, gonad homogenate | pacific geoduck | Panopea generosa | ||||||||||||||||||||
94 | 5 | 3 | 3 | Shellfish RNA Box #4 | RNA | pacific oyster | Crassostrea gigas | ctendia; adductor; mantle; gonad | |||||||||||||||||||
95 | 5 | 3 | 4 | ||||||||||||||||||||||||
96 | 5 | 3 | 5 | Geoduck Broodstock Lymph Samples 01-04-2019 | lymph | pacific geoduck | Panopea generosa | ||||||||||||||||||||
97 | 5 | 4 | 1 | Geoduck Broodstock Hemolymph Samples NOV2018 | lymph and hemocytes | pacific geoduck | Panopea generosa | ||||||||||||||||||||
98 | 5 | 4 | 2 | Geoduck Broodstock Hemocytes Samples 01-04-2019 | hemocytes | pacific geoduck | Panopea generosa | ||||||||||||||||||||
99 | 5 | 4 | 3 | Hemo. pellets and corresponding RNAlater supernatant for Tri-reagent extraction test; GAC 10/3/2010 | RNA; hemolymph | Tanner crab | Chionoecetes bairdi | ||||||||||||||||||||
100 | 5 | 4 | 4 |