| A | B | C | D | E | F | G | H | I | J | K | L | M | N | O | P | Q | R | S | T | U | V | W | X | Y | Z | AA | AB | AC | AD | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | rack | column | row | label | validate | Notes | remove | sample_type | common_name | scientific | tags | |||||||||||||||||||
2 | 1 | 1 | 1 | O. lurida from 2017 temp/OA parental exposure trial - multiple tissue collected after ~50day OA exposure (on 4/13/2017). South Sound F2 population ("K"), Box 1/2 (Laura) | yes | tissue | olympia oyster | Ostrea lurida | ctenidia, mantle, adductor | |||||||||||||||||||||
3 | 1 | 1 | 2 | O. lurida from 2017 temp/OA parental exposure trial - multiple tissue collected after ~50day OA exposure (on 4/13/2017). South Sound F2 population ("K"), Box 2/2 (Laura) | yes | tissue | olympia oyster | Ostrea lurida | ctenidia, mantle, adductor | |||||||||||||||||||||
4 | 1 | 1 | 3 | grace Crandall's samples from maristone, sea stars, 7.6.22 | yes | |||||||||||||||||||||||||
5 | 1 | 1 | 4 | |||||||||||||||||||||||||||
6 | 1 | 1 | 5 | |||||||||||||||||||||||||||
7 | 1 | 2 | 1 | Whole body juvenile Olympia Oyster, after acute OA shock, 2018-06-01, box 1/3 (Laura) | yes | tissue | olympia oyster | Ostrea lurida | ||||||||||||||||||||||
8 | 1 | 2 | 2 | Whole body juvenile Olympia Oyster, after acute OA shock, 2018-06-01, box 2/3 (Laura) | yes | tissue | olympia oyster | Ostrea lurida | ||||||||||||||||||||||
9 | 1 | 2 | 3 | Whole body juvenile Olympia Oyster, after acute OA shock, 2018-06-01, box 3/3 (Laura) | yes | tissue | olympia oyster | Ostrea lurida | ||||||||||||||||||||||
10 | 1 | 2 | 4 | RNA tissue 2019-02-22 (Alanna) | yes | |||||||||||||||||||||||||
11 | 1 | 2 | 5 | RNA tissue 2019-03-07 (Alanna) | yes | |||||||||||||||||||||||||
12 | 1 | 3 | 1 | Geoduck hemolymph samples for Emma, 9.9.2016, GAC | hemolymph | pacific geoduck | Panopea generosa | gonad, reproduction | ||||||||||||||||||||||
13 | 1 | 3 | 2 | O. lurida from 2017 temp/OA parental exposure trial - MANTLE tissue collected after ~50day OA exposure (on 4/8/2017). Fidalgo Bay, Hood Canal, and South Sound populations, Box 1/2 (Laura) | yes | tissue | olympia oyster | Ostrea lurida | mantle | |||||||||||||||||||||
14 | 1 | 3 | 3 | O. lurida from 2017 temp/OA parental exposure trial - MANTLE tissue collected after ~50day OA exposure (on 4/8/2017). Fidalgo Bay, Hood Canal, and South Sound populations, Box 2/2 (Laura) | yes | tissue | olympia oyster | Ostrea lurida | mantle | |||||||||||||||||||||
15 | 1 | 3 | 4 | O. lurida from 2017 temp/OA parental exposure trial - CTENIDIA tissue collected after ~50day OA exposure (on 4/8/2017). Fidalgo Bay, Hood Canal, and South Sound populations, Box 1/2 (Laura) | yes | tissue | olympia oyster | Ostrea lurida | ctenidia | |||||||||||||||||||||
16 | 1 | 3 | 5 | O. lurida from 2017 temp/OA parental exposure trial - CTENIDIA tissue collected after ~50day OA exposure (on 4/8/2017). Fidalgo Bay, Hood Canal, and South Sound populations, Box 2/2 (Laura) | yes | tissue | olympia oyster | Ostrea lurida | ctenidia | |||||||||||||||||||||
17 | 1 | 4 | 1 | O. lurida larvae from 2017 temp/OA parental exposure carryover effects. Box 1 of 2 (Laura) | yes | larvae | olympia oyster | Ostrea lurida | larvae, pooled | |||||||||||||||||||||
18 | 1 | 4 | 2 | O. lurida larvae from 2017 temp/OA parental exposure carryover effects. Box 2 of 2 (Laura) | yes | larvae | olympia oyster | Ostrea lurida | larvae, pooled | |||||||||||||||||||||
19 | 1 | 4 | 3 | O. lurida RNA isolated from larvae and gonad, 2017 temp/OA parental exposure carryover effects (Laura) | yes | RNA | olympia oyster | Ostrea lurida | larvae, gonad | |||||||||||||||||||||
20 | 1 | 4 | 4 | O. lurida ctenidia and larvae from 2017 temp/OA parental exposure carryover effects. Aliquots of 20 uL (split from other box). | yes | DNAsed RNA | olympia oyster | Ostrea lurida | ctenidia | |||||||||||||||||||||
21 | 1 | 4 | 5 | O. lurida ctenidia and larvae from 2017 temp/OA parental exposure carryover effects. Aliquots of 20 uL (split from other box). | yes | DNAsed RNA | olympia oyster | Ostrea lurida | ctenidia | |||||||||||||||||||||
22 | 2 | 1 | 1 | |||||||||||||||||||||||||||
23 | 2 | 1 | 2 | coelomocytes in 300ul DNA/RNA Shield; pycno, pisaster, derm; PSC 617-; summer 2023; box 6; GC, MP, AG, AM | yes | coelomocytes | sunflower sea star | Pycnopodia helianthoides; Pisaster ochraceus; D. imbricata | ||||||||||||||||||||||
24 | 2 | 1 | 3 | Hard Clam Hemolymph in RNA Later Rec'd 5/5/10 SJW | yes | hard clam | Mercenaria mercenaria | |||||||||||||||||||||||
25 | 2 | 1 | 4 | C.gigas Tissues from Nisbet Oysters Rec'd 2/28/2018 | no | tissue | pacific oyster | Crassostrea gigas | triploid; ctenidia; gonad; mantle; adductor muscle; | |||||||||||||||||||||
26 | 2 | 1 | 5 | pycno, derm, pisaster coelomocyte supernatant, PSCS 444-; summer 2023; MP, AG, GC | yes | coelomocyte supernatant | sunflower sea star | Pycnopodia helianthoides; Pisaster ochraceus; D. imbricata | ||||||||||||||||||||||
27 | 2 | 2 | 1 | |||||||||||||||||||||||||||
28 | 2 | 2 | 2 | Tanner crab Isolated RNA from Hemolymph; GAC; 04/26/2018 | yes | RNA | Tanner crab | Chionoecetes bairdi | ||||||||||||||||||||||
29 | 2 | 2 | 3 | pycno, derm, pisaster coelomocytes in 300ul shield; PSC 684-; summer 2023; PSC; box 7; MP, AG, GC | yes | coelomocytes | sunflower sea star | Pycnopodia helianthoides | ||||||||||||||||||||||
30 | 2 | 2 | 4 | |||||||||||||||||||||||||||
31 | 2 | 2 | 5 | sswd summer 2023 experiments; coelmocyte (PSC) from P. helianthoides, P. ochraceus, O. imbricata; box 8; PSC 764; GC, AG, MP | yes | coelomocytes | sunflower sea star | Pycnopodia helianthoides; Pisaster ochraceus; D. imbricata | ||||||||||||||||||||||
32 | 2 | 3 | 1 | Shellfish RNA Box #7 | yes | RNA | tanner crab | Chionoecetes bairdi | hemolymph; DNased | |||||||||||||||||||||
33 | 2 | 3 | 2 | O. lurida visceral mass from 2018 Winter Temp/Food experiment (population = Mud Bay) | yes | tissue - visceral mass (gonad, gut) | olympia oyster | Ostrea lurida | gonad, gut, hepatopancreas | |||||||||||||||||||||
34 | 2 | 3 | 3 | O. lurida visceral mass from 2018 Winter Temp/Food experiment (population = Mud Bay) | yes | tissue - visceral mass (gonad, gut) | olympia oyster | Ostrea lurida | gonad, gut, hepatopancreas | |||||||||||||||||||||
35 | 2 | 3 | 4 | SSWD summer 2023 experiments; coelomocyte supernatant (PSCS) from P. helianthoides; P. ochraceus; D. imbricata; box 8; PSCS 527-; GC, AG, MP | yes | coelomocyte supernatant | sunflower sea star | Pycnopodia helianthoides; Pisaster ochraceus; D. imbricata | ||||||||||||||||||||||
36 | 2 | 3 | 5 | Shellfish RNA Box #8 | yes | RNA | tanner crab; pacific geoduck | Chionoecetes bairdi; Panopea generosa | hemolymph; DNased | |||||||||||||||||||||
37 | 2 | 4 | 1 | O. lurida larvae collected & frozen upon release from 2018 Winter Temp/Food experiment (population = Mud Bay) | yes | larvae | olympia oyster | Ostrea lurida | larvae, pooled | |||||||||||||||||||||
38 | 2 | 4 | 2 | O. lurida larvae collected & frozen upon release from 2018 Winter Temp/Food experiment (population = Mud Bay) | yes | larvae | olympia oyster | Ostrea lurida | larvae, pooled | |||||||||||||||||||||
39 | 2 | 4 | 3 | O. lurida larvae collected & frozen upon release from 2018 Winter Temp/Food experiment (population = Mud Bay) | yes | larvae | olympia oyster | Ostrea lurida | larvae, pooled | |||||||||||||||||||||
40 | 2 | 4 | 4 | O. lurida larvae collected & frozen upon release from 2018 Winter Temp/Food experiment (population = Mud Bay) | yes | larvae | olympia oyster | Ostrea lurida | larvae, pooled | |||||||||||||||||||||
41 | 2 | 4 | 5 | C.gigas, C.sikamea mantle from Marinelli Shellfish 10/30/2019 | yes | tissue (mantle) | pacific oyster; kumamoto | Crassostrea gigas; Crassostrea sikamea | tissue; mantle | |||||||||||||||||||||
42 | 3 | 1 | 1 | O. lurida from 2017 temp/OA parental exposure trial - ADDUCTOR tissue collected after ~50day OA exposure (on 4/8/2017). Fidalgo Bay, Hood Canal, and South Sound populations, Box 1/2 (Laura) | yes | tissue | olympia oyster | Ostrea lurida | adductor | |||||||||||||||||||||
43 | 3 | 1 | 2 | O. lurida from 2017 temp/OA parental exposure trial - ADDUCTOR tissue collected after ~50day OA exposure (on 4/8/2017). Fidalgo Bay, Hood Canal, and South Sound populations, Box 2/2 (Laura) | yes | tissue | olympia oyster | Ostrea lurida | adductor | |||||||||||||||||||||
44 | 3 | 1 | 3 | Copepod RNA | yes | RNA | ||||||||||||||||||||||||
45 | 3 | 1 | 4 | Illumina Library Oligos & Barcodes | yes | |||||||||||||||||||||||||
46 | 3 | 1 | 5 | pycno, derm, pissater coelomocyte supernatant; summer 2023; PSCS 675; box 10; PSCS | yes | coelomocyte supernatant | sunflower sea star; ochre star; leather star | Pycnopodia helianthoides; Pisaster ochraceus; Dermasterias imbricata | ||||||||||||||||||||||
47 | 3 | 2 | 1 | |||||||||||||||||||||||||||
48 | 3 | 2 | 2 | |||||||||||||||||||||||||||
49 | 3 | 2 | 3 | C. bairdi hemolymph RNA eluted in TE; Zymo Quick DNA/RNA microprep Plus Kit; GAC; 01/14/2020 | yes | RNA | tanner crab | Chionoecetes bairdi | hemolymph | |||||||||||||||||||||
50 | 3 | 2 | 4 | Mytilus galloprovincialis mfp-3 knockdown siRNA | yes | siRNA | mediterranean mussel | Mytilus galloprovincialis | ||||||||||||||||||||||
51 | 3 | 2 | 5 | SB NB WB Juveniles 35x51 Dec 09 C.gigas Bioindicator | yes | pacific oyster | Crassostrea gigas | |||||||||||||||||||||||
52 | 3 | 3 | 1 | Vibrio Protein | yes | proteins | Vibrio tubiashii | |||||||||||||||||||||||
53 | 3 | 3 | 2 | EE2v2 T=0 + Day 7 (1.25.13) | yes | |||||||||||||||||||||||||
54 | 3 | 3 | 3 | C.gigas Field Samples Aug 2009 BB, LC, DH | yes | pacific oyster | Crassostrea gigas | |||||||||||||||||||||||
55 | 3 | 3 | 4 | C. gigas embryo samples 3/11/20 | yes | tissue | pacific oyster | Crassostrea gigas | embryo | |||||||||||||||||||||
56 | 3 | 3 | 5 | EE2v2 day 60#111-141 gonad, 160 gill | no | no box | tissue | pacific oyster | Crassostrea gigas | |||||||||||||||||||||
57 | 3 | 4 | 1 | C.gigas Tissues - High pH from Maria Haws Rec'd 12/10/2019 | yes | tissue | pacific oyster | Crassostrea gigas | adductor muscle;gill;gonad;mantle | |||||||||||||||||||||
58 | 3 | 4 | 2 | C. bairdi extracted hemolymph RNA in RNAse-free H20; Box 2; 10/31/2019; GAC | yes | RNA | tanner crab | Chionoecetes bairdi | ||||||||||||||||||||||
59 | 3 | 4 | 3 | C.gigas Tissues - Low pH from Maria Haws Rec'd 12/10/2019 | yes | tissue | pacific oyster | Crassostrea gigas | adductor muscle;gill;gonad;mantle | |||||||||||||||||||||
60 | 3 | 4 | 4 | Juv: NB, SB, WB Adults: SB APBIL2010 | yes | |||||||||||||||||||||||||
61 | 3 | 4 | 5 | EE2 Trial: Day 60 | yes | |||||||||||||||||||||||||
62 | 4 | 1 | 1 | EE2 Trial: Day 35 Samples Tanks 3 + 4 box 3 of 5 | yes | pacific oyster | Crassostrea gigas | |||||||||||||||||||||||
63 | 4 | 1 | 2 | EE2 Trial: Day 35 Samples Tanks 4 + 5 box 4 of 5 | yes | pacific oyster | Crassostrea gigas | |||||||||||||||||||||||
64 | 4 | 1 | 3 | EE2 Trial: Day 35 Samples Tanks 5 + 6 box 5 of 5 | yes | pacific oyster | Crassostrea gigas | |||||||||||||||||||||||
65 | 4 | 1 | 4 | EE2 Experiment T=0 tissue Samples / 2 week samples 5.16.12 MG | yes | tissue | pacific oyster | Crassostrea gigas | ||||||||||||||||||||||
66 | 4 | 1 | 5 | NOAA - Olympia oyster Box B | yes | olympia oyster | Ostrea lurida | |||||||||||||||||||||||
67 | 4 | 2 | 1 | NOAA - Olympia oyster Box C | yes | olympia oyster | Ostrea lurida | |||||||||||||||||||||||
68 | 4 | 2 | 2 | Sam's RNA Box #1 | yes | RNA | ||||||||||||||||||||||||
69 | 4 | 2 | 3 | NOAA - Oly Oyster - "A" | yes | olympia oyster | Ostrea lurida | |||||||||||||||||||||||
70 | 4 | 2 | 4 | EE2 Trial 2 week timepoint 5.30.12 MG Tissue: Gonad | yes | tissue | pacific oyster | Crassostrea gigas | ||||||||||||||||||||||
71 | 4 | 2 | 5 | Laura Spencer RNA Oly Larvae 20 µL aliquots DNASeq | yes | RNA | olympia oyster | Ostrea lurida | ||||||||||||||||||||||
72 | 4 | 3 | 1 | |||||||||||||||||||||||||||
73 | 4 | 3 | 2 | Geoduck Juvs. 10/18/2019 Shelly | yes | whole animal | pacific geoduck | Panopea generosa | end point samples | |||||||||||||||||||||
74 | 4 | 3 | 3 | Respirometry Geoduck Juvs. + Geoduck Juvs 10/18/2019 Shelly | yes | whole animal | pacific geoduck | Panopea generosa | end point samples | |||||||||||||||||||||
75 | no | |||||||||||||||||||||||||||||
76 | 4 | 3 | 5 | EE2 week 5 Tank 1-2 | yes | pacific oyster | Crassostrea gigas | |||||||||||||||||||||||
77 | 4 | 4 | 1 | USDA-SRGARP-gigas-carryover Box 2- 1 month samples | unlabeled box | unlabeled box | tissue | pacific oyster | Crassostrea gigas | |||||||||||||||||||||
78 | 4 | 4 | 2 | Laura: Olympia oyster DNased RNA, 2017 OA/T study, from ctenidia & larvae for QuantSeq | yes | RNA | olympia oyster | Ostrea lurida | ||||||||||||||||||||||
79 | 4 | 4 | 3 | Laura: Olympia oyster DNased RNA, 2017 OA/T study, from ctenidia & larvae for QuantSeq | yes | RNA | olympia oyster | Ostrea lurida | ||||||||||||||||||||||
80 | 4 | 4 | 4 | USDA-SRGARP-gigas-carryover Box 1; whole oyster tissue samples from poly(I:C) pilot | no | EE2 box | RNA | pacific oyster | Crassostrea Gigas | |||||||||||||||||||||
81 | 4 | 4 | 5 | Sam's RNA Box #2 | yes | RNA | sockeye salmon | Onchorynchus nerka | brain;liver;gonad | |||||||||||||||||||||
82 | 5 | 1 | 1 | Sam's geoduck samples 2018/08/13 | JL | |||||||||||||||||||||||||
83 | 5 | 1 | 2 | |||||||||||||||||||||||||||
84 | 5 | 1 | 3 | USDA gigas DNA 11/17/22 | yes | JL | ||||||||||||||||||||||||
85 | 5 | 1 | 4 | |||||||||||||||||||||||||||
86 | 5 | 1 | 5 | USDA-SRGARP-gigas-carryover Box 1; whole oyster tissue samples from poly(I:C) pilot | yes | JL | whole animal tissue sample | Pacific oyster | Crassostrea gigas | i = injected, mgcl - anathesia control, e = emersion, | ||||||||||||||||||||
87 | 5 | 2 | 1 | |||||||||||||||||||||||||||
88 | 5 | 2 | 2 | |||||||||||||||||||||||||||
89 | 5 | 2 | 3 | |||||||||||||||||||||||||||
90 | 5 | 2 | 4 | O. orca archived Tissue from NWFSC; Emma 2/4/10 | yes | |||||||||||||||||||||||||
91 | 5 | 2 | 5 | |||||||||||||||||||||||||||
92 | 5 | 3 | 1 | Shelly Trigg 10-31-18 | yes | hemolymph | pacific geoduck | Panopea generosa | ||||||||||||||||||||||
93 | 5 | 3 | 2 | Geoduck Calcium Assay Samples 12-07-2018 | yes | hemolymph, gonad homogenate | pacific geoduck | Panopea generosa | ||||||||||||||||||||||
94 | 5 | 3 | 3 | Shellfish RNA Box #4 | yes | RNA | pacific oyster | Crassostrea gigas | ctendia; adductor; mantle; gonad | |||||||||||||||||||||
95 | 5 | 3 | 4 | FISH 541 samples | yes | JL | ||||||||||||||||||||||||
96 | 5 | 3 | 5 | Geoduck Broodstock Lymph Samples 01-04-2019 | yes | lymph | pacific geoduck | Panopea generosa | ||||||||||||||||||||||
97 | 5 | 4 | 1 | Geoduck Broodstock Hemolymph Samples NOV2018 | yes | lymph and hemocytes | pacific geoduck | Panopea generosa | ||||||||||||||||||||||
98 | 5 | 4 | 2 | Geoduck Broodstock Hemocytes Samples 01-04-2019 | yes | hemocytes | pacific geoduck | Panopea generosa | ||||||||||||||||||||||
99 | 5 | 4 | 3 | Hemo. pellets and corresponding RNAlater supernatant for Tri-reagent extraction test; GAC 10/3/2010 | yes | RNA; hemolymph | Tanner crab | Chionoecetes bairdi | ||||||||||||||||||||||
100 | 5 | 4 | 4 | FISH 541 | yes | JL |