| A | B | C | D | E | F | G | H | I | J | K | L | M | N | O | R | S | T | U | V | W | X | Y | Z | AA | AB | AC | AD | AE | AF | ||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | SeqID | Library_ID | Library_name | Sample-prep_person | Sample-prep_url | Primary_taxa | SeqSubmissionDate | SeqReceiptDate | Tissue | Molecule | Platform | Sequencer | Length | BriefDesc | SRA_ID | Experiment | Product_url | Read1FileLocation | Read1URL | Read1FastQC | Read2FileLocation | Read2URL | Read2FastQC | ||||||||
18 | solid0078_20091105_RbbertsLab_DH2_F3 | 7 | DH2 | MG | http://genefish.wikispaces.com/Mac%27s+Notebook | C_gigas | 20091111 | ctenidia | RNA | SOLiD | SE25 | Drayton Harbor | /Volumes/web/nightingales/C_gigas/solid0078_20091105_RbbertsLab_DH2_F3.tar.gz | http://owl.fish.washington.edu/nightingales/C_gigas/solid0078_20091105_RbbertsLab_DH2_F3.tar.gz | |||||||||||||||||
21 | solid0078_20091105_DH3 | 8 | DH3 | MG | http://genefish.wikispaces.com/Mac%27s+Notebook | C_gigas | 20091111 | ctenidia | RNA | SOLiD | SE25 | Drayton Harbor | http://www.sciencedirect.com/science/article/pii/S1744117X11001018 | /Volumes/web/nightingales/C_gigas/solid0078_20091105_DH3.tar.gz | http://owl.fish.washington.edu/nightingales/C_gigas/solid0078_20091105_DH3.tar.gz | ||||||||||||||||
24 | solid0078_20091105_BB3 | 9 | BB3 | MG | http://genefish.wikispaces.com/Mac%27s+Notebook | C_gigas | 20091111 | ctenidia | RNA | SOLiD | SE25 | Big Beef Creek | http://www.sciencedirect.com/science/article/pii/S1744117X11001018 | /Volumes/web/nightingales/C_gigas/solid0078_20091105_BB3.tar.gz | http://owl.fish.washington.edu/nightingales/C_gigas/solid0078_20091105_BB3.tar.gz | ||||||||||||||||
39 | solid0078_20091105_RbbertsLab_GE_F3 | 14 | GE | CAB | C_gigas | 20091111 | ctenidia | RNA | SOLiD | SE25 | oshv | Exposed | /Volumes/web/nightingales/C_gigas/solid0078_20091105_RbbertsLab_GE_F3.tar.gz | http://owl.fish.washington.edu/nightingales/C_gigas/solid0078_20091105_RbbertsLab_GE_F3.tar.gz | |||||||||||||||||
42 | solid0078_20100107_MD_Roberts_Hao_64A_71A_64B_Roberts_GC_F3 | 15 | GC | CAB | C_gigas | 20100107 | larvae | SOLiD | SE25 | Control | Control | /Volumes/web/nightingales/C_gigas/solid0078_20100107_MD_Roberts_Hao_64A_71A_64B_Roberts_GC_F3.tar.gz | http://owl.fish.washington.edu/nightingales/C_gigas/solid0078_20100107_MD_Roberts_Hao_64A_71A_64B_Roberts_GC_F3.tar.gz | ||||||||||||||||||
75 | solid0078_20110412_FRAG_BC_WHITE_WHITE_F3_SB_UNMETH | 32 | SB unmeth C.gigas | C_gigas | 20110419 | gill | DNA | SOLiD | SE25 | https://img.skitch.com/20111020-p2guuhtqgff481139jikgdyn46.png | /Volumes/web/nightingales/C_gigas/solid0078_20110412_FRAG_BC_WHITE_WHITE_F3_SB_UNMETH.tar.gz | http://owl.fish.washington.edu/nightingales/C_gigas/solid0078_20110412_FRAG_BC_WHITE_WHITE_F3_SB_UNMETH.tar.gz | |||||||||||||||||||
76 | solid0078_20110412_FRAG_BC_WHITE_WHITE_F3_SB_METH | 34 | SB meth C.gigas | C_gigas | 20110419 | gill | DNA | SOLiD | SE25 | /Volumes/web/nightingales/C_gigas/solid0078_20110412_FRAG_BC_WHITE_WHITE_F3_SB_METH.tar.gz | http://owl.fish.washington.edu/nightingales/C_gigas/solid0078_20110412_FRAG_BC_WHITE_WHITE_F3_SB_METH.tar.gz | ||||||||||||||||||||
83 | filtered_BSseqGill_L003 | 47 | SB MBD meth (bisulfite) | C_gigas | 20120130 | gill | DNA | Illumina | SE36 | BS-seq | SRX327373 | Predominant intragenic methylation is associated with gene expression characteristics in a bivalve mollusc | /Volumes/web/nightingales/C_gigas/filtered_BSseqGill_L003_R1.fastq.gz | http://owl.fish.washington.edu/nightingales/C_gigas/filtered_BSseqGill_L003_R1.fastq.gz | |||||||||||||||||
102 | filtered_174gm_A_BiGosperm_L006 | 65 | 174.gm | C_gigas | 20121011 | 20121219 | sperm | DNA | Illumina | PE72 | BS-seq | SRX386228 | Genome-wide profiling of DNA methylation and gene expression in Crassostrea gigas male gametes | /Volumes/web/nightingales/C_gigas/filtered_174gm_A_BiGosperm_L006_R1.fastq.gz | http://owl.fish.washington.edu/nightingales/C_gigas/filtered_174gm_A_BiGosperm_L006_R1.fastq.gz | /Volumes/web/nightingales/C_gigas/filtered_174gm_A_BiGosperm_L006_R2.fastq.gz | http://owl.fish.washington.edu/nightingales/C_gigas/filtered_174gm_A_BiGosperm_L006_R2.fastq.gz | ||||||||||||||
103 | BiGillRNA_GACTAAGA | 67 | SB_Pool | CHO | https://www.evernote.com/pub/che625/che625snotebook#st=p&n=13407ef0-b2b8-4c07-9bc8-1bbc73f42a2d | C_gigas | 20130514 | 20130709 | gill | RNA | Illumina | PE50 | pool of Sammish Bay gill samples | comparison of Sammish Bay oyster BS-seq and RNAseq profiles | /Volumes/web/nightingales/C_gigas/BiGillR_GACTAAGA_1.fastq.gz | http://owl.fish.washington.edu/nightingales/C_gigas/BiGillR_GACTAAGA_1.fastq.gz | /Volumes/web/nightingales/C_gigas/BiGillR_GACTAAGA_2.fastq.gz | http://owl.fish.washington.edu/nightingales/C_gigas/BiGillR_GACTAAGA_2.fastq.gz | |||||||||||||
104 | BiGoRNA_GTGTCTAC | 68 | 174_gm | CHO | https://www.evernote.com/pub/che625/che625snotebook#st=p&n=13407ef0-b2b8-4c07-9bc8-1bbc73f42a2d | C_gigas | 20130514 | 20130709 | gonad | RNA | Illumina | PE50 | SRX386228 | Genome-wide profiling of DNA methylation and gene expression in Crassostrea gigas male gametes | /Volumes/web/nightingales/C_gigas/BiGoR_GTGTCTAC_1.fastq.gz | http://owl.fish.washington.edu/nightingales/C_gigas/BiGoR_GTGTCTAC_1.fastq.gz | /Volumes/web/nightingales/C_gigas/BiGoR_GTGTCTAC_2.fastq.gz | http://owl.fish.washington.edu/nightingales/C_gigas/BiGoR_GTGTCTAC_2.fastq.gz | |||||||||||||
105 | CgF_CGATGT_L003 | 70 | BS CgF | C_gigas | 20140902 | gonad | DNA | Illumina | PE36 | BS-seq | /Volumes/web/nightingales/C_gigas/CgF_CGATGT_L003_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/C_gigas/CgF_CGATGT_L003_R1_001.fastq.gz | /Volumes/web/nightingales/C_gigas/CgF_CGATGT_L003_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/C_gigas/CgF_CGATGT_L003_R2_001.fastq.gz | |||||||||||||||||
106 | filtered_Y38_control_GTGAAA_L007 | 77 | Y38-control | Yanouk | C_gigas | 20131104 | larvae | DNA | Illumina | PE36 | control | /Volumes/web/nightingales/C_gigas/filtered_Y38_control_GTGAAA_L007_R1.fastq.gz | http://owl.fish.washington.edu/nightingales/C_gigas/filtered_Y38_control_GTGAAA_L007_R1.fastq.gz | /Volumes/web/nightingales/C_gigas/ | http://owl.fish.washington.edu/nightingales/C_gigas/ | ||||||||||||||||
107 | filtered_Y38_control_GTGAAA_L005 | 77 | Y38-control | Yanouk | C_gigas | 20131213 | larvae | DNA | Illumina | PE36 | control | /Volumes/web/nightingales/C_gigas/filtered_Y38_control_GTGAAA_L005_R1.fastq.gz | http://owl.fish.washington.edu/nightingales/C_gigas/filtered_Y38_control_GTGAAA_L005_R1.fastq.gz | /Volumes/web/nightingales/C_gigas/filtered_Y38_control_GTGAAA_L005_R2.fastq.gz | http://owl.fish.washington.edu/nightingales/C_gigas/filtered_Y38_control_GTGAAA_L005_R2.fastq.gz | ||||||||||||||||
108 | Y38_ACAGTG_L003 | 77 | Y38-control | C_gigas | 20140902 | larvae | DNA | Illumina | PE36 | BS-seq | /Volumes/web/nightingales/C_gigas/Y38_ACAGTG_L003_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/C_gigas/Y38_ACAGTG_L003_R1_001.fastq.gz | /Volumes/web/nightingales/C_gigas/Y38_ACAGTG_L003_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/C_gigas/Y38_ACAGTG_L003_R2_001.fastq.gz | |||||||||||||||||
109 | filtered_Y54_Mix_GTGGCC_L007 | 78 | Y54-mix | Yanouk | C_gigas | 20131104 | larvae | DNA | Illumina | PE36 | Metconazole 0,2µg/l + Isoproturon 0,1 µg/l | /Volumes/web/nightingales/C_gigas/filtered_Y54_Mix_GTGGCC_L007_R1.fastq.gz | http://owl.fish.washington.edu/nightingales/C_gigas/filtered_Y54_Mix_GTGGCC_L007_R1.fastq.gz | /Volumes/web/nightingales/C_gigas/ | http://owl.fish.washington.edu/nightingales/C_gigas/ | ||||||||||||||||
110 | filtered_Y54_Mix_GTGGCC_L005 | 78 | Y54-mix | Yanouk | C_gigas | 20131213 | larvae | DNA | Illumina | PE36 | Metconazole 0,2µg/l + Isoproturon 0,1 µg/l | /Volumes/web/nightingales/C_gigas/filtered_Y54_Mix_GTGGCC_L005_R1.fastq.gz | http://owl.fish.washington.edu/nightingales/C_gigas/filtered_Y54_Mix_GTGGCC_L005_R1.fastq.gz | /Volumes/web/nightingales/C_gigas/filtered_Y54_Mix_GTGGCC_L005_R2.fastq.gz | http://owl.fish.washington.edu/nightingales/C_gigas/filtered_Y54_Mix_GTGGCC_L005_R2.fastq.gz | ||||||||||||||||
114 | 2M_AGTCAA_L001 | 86 | 2M | C_gigas | 20141124 | 20141215 | mantle | RNA | Illumina HiSeq2500 | SE100 | pre_heat_shock | SRP072251 | pre and post heat shock | /Volumes/web/nightingales/C_gigas/2M_AGTCAA_L001_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/C_gigas/2M_AGTCAA_L001_R1_001.fastq.gz | ||||||||||||||||
116 | 4M_AGTTCC_L001 | 87 | 4M | C_gigas | 20141124 | 20141215 | mantle | RNA | Illumina HiSeq2500 | SE100 | pre_heat_shock | SRP072251 | pre and post heat shock | /Volumes/web/nightingales/C_gigas/4M_AGTTCC_L001_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/C_gigas/4M_AGTTCC_L001_R1_001.fastq.gz | ||||||||||||||||
118 | 6M_ATGTCA_L001 | 88 | 6M | C_gigas | 20141124 | 20141215 | mantle | RNA | Illumina HiSeq2500 | SE100 | pre_heat_shock | SRP072251 | pre and post heat shock | /Volumes/web/nightingales/C_gigas/6M_ATGTCA_L001_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/C_gigas/6M_ATGTCA_L001_R1_001.fastq.gz | ||||||||||||||||
120 | 2M-HS_CCGTCC_L001 | 89 | 2M HS | C_gigas | 20141124 | 20141215 | mantle | RNA | Illumina HiSeq2500 | SE100 | post_heat_shock | SRP072251 | pre and post heat shock | /Volumes/web/nightingales/C_gigas/2M-HS_CCGTCC_L001_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/C_gigas/2M-HS_CCGTCC_L001_R1_001.fastq.gz | ||||||||||||||||
121 | 4M-HS_GTCCGC_L001 | 90 | 4M HS | C_gigas | 20141124 | 20141215 | mantle | RNA | Illumina HiSeq2500 | SE100 | post_heat_shock | SRP072251 | pre and post heat shock | /Volumes/web/nightingales/C_gigas/4M-HS_GTCCGC_L001_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/C_gigas/4M-HS_GTCCGC_L001_R1_001.fastq.gz | ||||||||||||||||
122 | 6M-HS_GTGAAA_L001 | 91 | 6M HS | C_gigas | 20141124 | 20141215 | mantle | RNA | Illumina HiSeq2500 | SE100 | post_heat_shock | SRP072251 | pre and post heat shock | /Volumes/web/nightingales/C_gigas/6M-HS_GTGAAA_L001_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/C_gigas/6M-HS_GTGAAA_L001_R1_001.fastq.gz | ||||||||||||||||
129 | 2212_lane2_GCCAAT_L002 | 99 | 400ppm | SJW | http://onsnetwork.org/kubu4/category/2011-gigas-larvae-oa-bisulfite-sequencing/ | C_gigas | 20150303 | 20150413 | larvae | DNA | Illumina | SE100 | BS-seq | 400ppm | /Volumes/web/nightingales/C_gigas/2212_lane2_GCCAAT_L002_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/C_gigas/2212_lane2_GCCAAT_L002_R1_001.fastq.gz | |||||||||||||||
130 | 2212_lane2_CTTGTA_L002 | 100 | 1000ppm | SJW | http://onsnetwork.org/kubu4/category/2011-gigas-larvae-oa-bisulfite-sequencing/ | C_gigas | 20150303 | 20150413 | larvae | DNA | Illumina | SE100 | BS-seq | 1000ppm | /Volumes/web/nightingales/C_gigas/2212_lane2_CTTGTA_L002_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/C_gigas/2212_lane2_CTTGTA_L002_R1_001.fastq.gz | |||||||||||||||
131 | Geo_Pool_F_GGCTAC_L006 | 101 | Geo_pool_F | P_generosa | 20150629 | gonad | RNA | Illumina | PE100 | pooled female gonadal stages | SRP072283 | gonad development | /Volumes/web/nightingales/P_generosa/Geo_Pool_F_GGCTAC_L006_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/Geo_Pool_F_GGCTAC_L006_R1_001.fastq.gz | /Volumes/web/nightingales/P_generosa/Geo_Pool_F_GGCTAC_L006_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/Geo_Pool_F_GGCTAC_L006_R2_001.fastq.gz | |||||||||||||||
132 | Geo_Pool_M_CTTGTA_L006 | 102 | Geo_pool_M | P_generosa | 20150629 | gonad | RNA | Illumina | PE100 | pooled male gonadal stages | SRP072283 | gonad development | /Volumes/web/nightingales/P_generosa/Geo_Pool_M_CTTGTA_L006_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/Geo_Pool_M_CTTGTA_L006_R1_001.fastq.gz | /Volumes/web/nightingales/P_generosa/Geo_Pool_M_CTTGTA_L006_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/Geo_Pool_M_CTTGTA_L006_R2_001.fastq.gz | |||||||||||||||
447 | 9_GATCAG_L001 | 118 | M2 | SJW | http://onsnetwork.org/kubu4/category/olympia-oyster-reciprocal-transplant/bs-seq-libraries-for-genewiz/ | C_gigas | 20151222 | 20160108 | tissue | DNA | Illumina | SE50 | BS-seq | Lotterhos BSseq | /Volumes/web/nightingales/C_gigas/9_GATCAG_L001_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/C_gigas/9_GATCAG_L001_R1_001.fastq.gz | |||||||||||||||
448 | 10_TAGCTT_L001 | 119 | M3 | SJW | http://onsnetwork.org/kubu4/category/olympia-oyster-reciprocal-transplant/bs-seq-libraries-for-genewiz/ | C_gigas | 20151222 | 20160108 | tissue | DNA | Illumina | SE50 | BS-seq | Lotterhos BSseq | /Volumes/web/nightingales/C_gigas/10_TAGCTT_L001_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/C_gigas/10_TAGCTT_L001_R1_001.fastq.gz | |||||||||||||||
557 | 151114_I191_FCH3Y35BCXX_L1_wHAIPI023989-79 | 121 | wHAIPI023989-79 | P_generosa | 20160126 | ctenidia, foot | DNA | Illumina | PE150 | genome sequencing | SRP072453 | genome sequencing | /Volumes/web/nightingales/P_generosa/151114_I191_FCH3Y35BCXX_L1_wHAIPI023989-79_1.fq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/151114_I191_FCH3Y35BCXX_L1_wHAIPI023989-79_1.fq.gz | http://owl.fish.washington.edu/Athaliana/20180327_bgi_fastqc/151114_I191_FCH3Y35BCXX_L1_wHAIPI023989-79_1_fastqc.html | /Volumes/web/nightingales/P_generosa/151114_I191_FCH3Y35BCXX_L1_wHAIPI023989-79_2.fq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/151114_I191_FCH3Y35BCXX_L1_wHAIPI023989-79_2.fq.gz | http://owl.fish.washington.edu/Athaliana/20180327_bgi_fastqc/151114_I191_FCH3Y35BCXX_L1_wHAIPI023989-79_2_fastqc.html | |||||||||||||
559 | 151114_I191_FCH3Y35BCXX_L2_wHAMPI023988-81 | 122 | wHAMPI023988_81 | P_generosa | 20160126 | ctenidia, foot | DNA | Illumina | PE150 | genome sequencing | SRP072453 | genome sequencing | /Volumes/web/nightingales/P_generosa/151114_I191_FCH3Y35BCXX_L2_wHAMPI023988-81_1.fq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/151114_I191_FCH3Y35BCXX_L2_wHAMPI023988-81_1.fq.gz | http://owl.fish.washington.edu/Athaliana/20180327_bgi_fastqc/151114_I191_FCH3Y35BCXX_L2_wHAMPI023988-81_1_fastqc.html | /Volumes/web/nightingales/P_generosa/151114_I191_FCH3Y35BCXX_L2_wHAMPI023988-81_2.fq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/151114_I191_FCH3Y35BCXX_L2_wHAMPI023988-81_2.fq.gz | http://owl.fish.washington.edu/Athaliana/20180327_bgi_fastqc/151114_I191_FCH3Y35BCXX_L2_wHAMPI023988-81_2_fastqc.html | |||||||||||||
561 | 151122_I136_FCH3L2FBBXX_L7_wHAXPI023990-97 | 123 | wHAXPI023990_97 | P_generosa | 20160126 | ctenidia, foot | DNA | Illumina | PE150 | genome sequencing | SRP072453 | genome sequencing | /Volumes/web/nightingales/P_generosa/151122_I136_FCH3L2FBBXX_L7_wHAXPI023990-97_1.fq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/151122_I136_FCH3L2FBBXX_L7_wHAXPI023990-97_1.fq.gz | http://owl.fish.washington.edu/Athaliana/20180327_bgi_fastqc/151122_I136_FCH3L2FBBXX_L7_wHAXPI023990-97_1_fastqc.html | /Volumes/web/nightingales/P_generosa/151122_I136_FCH3L2FBBXX_L7_wHAXPI023990-97_2.fq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/151122_I136_FCH3L2FBBXX_L7_wHAXPI023990-97_2.fq.gz | http://owl.fish.washington.edu/Athaliana/20180327_bgi_fastqc/151122_I136_FCH3L2FBBXX_L7_wHAXPI023990-97_2_fastqc.html | |||||||||||||
563 | 160103_I137_FCH3V5YBBXX_L5_WHPANwalDDABDLAAPEI-100 | 124 | WHPANwalDDABDLAAPEI_100 | P_generosa | 20160126 | ctenidia, foot | DNA | Illumina | PE50 | genome sequencing | SRP072453 | genome sequencing | /Volumes/web/nightingales/P_generosa/160103_I137_FCH3V5YBBXX_L5_WHPANwalDDABDLAAPEI-100_1.fq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/160103_I137_FCH3V5YBBXX_L5_WHPANwalDDABDLAAPEI-100_1.fq.gz | http://owl.fish.washington.edu/Athaliana/20180327_bgi_fastqc/160103_I137_FCH3V5YBBXX_L5_WHPANwalDDABDLAAPEI-100_1_fastqc.html | /Volumes/web/nightingales/P_generosa/160103_I137_FCH3V5YBBXX_L5_WHPANwalDDABDLAAPEI-100_2.fq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/160103_I137_FCH3V5YBBXX_L5_WHPANwalDDABDLAAPEI-100_2.fq.gz | http://owl.fish.washington.edu/Athaliana/20180327_bgi_fastqc/160103_I137_FCH3V5YBBXX_L5_WHPANwalDDABDLAAPEI-100_2_fastqc.html | |||||||||||||
564 | 160103_I137_FCH3V5YBBXX_L6_WHPANwalDDABDLAAPEI-100 | 124 | WHPANwalDDABDLAAPEI_100 | P_generosa | 20160126 | ctenidia, foot | DNA | Illumina | PE50 | genome sequencing | SRP072453 | genome sequencing | /Volumes/web/nightingales/P_generosa/160103_I137_FCH3V5YBBXX_L6_WHPANwalDDABDLAAPEI-100_1.fq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/160103_I137_FCH3V5YBBXX_L6_WHPANwalDDABDLAAPEI-100_1.fq.gz | http://owl.fish.washington.edu/Athaliana/20180327_bgi_fastqc/160103_I137_FCH3V5YBBXX_L6_WHPANwalDDABDLAAPEI-100_1_fastqc.html | /Volumes/web/nightingales/P_generosa/160103_I137_FCH3V5YBBXX_L6_WHPANwalDDABDLAAPEI-100_2.fq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/160103_I137_FCH3V5YBBXX_L6_WHPANwalDDABDLAAPEI-100_2.fq.gz | http://owl.fish.washington.edu/Athaliana/20180327_bgi_fastqc/160103_I137_FCH3V5YBBXX_L6_WHPANwalDDACDTAAPEI-102_2_fastqc.html | |||||||||||||
565 | 160103_I137_FCH3V5YBBXX_L3_WHPANwalDDAADWAAPEI-101 | 125 | WHPANwalDDACDTAAPEI_101 | P_generosa | 20160126 | ctenidia, foot | DNA | Illumina | PE50 | genome sequencing | SRP072453 | genome sequencing | /Volumes/web/nightingales/P_generosa/160103_I137_FCH3V5YBBXX_L3_WHPANwalDDAADWAAPEI-101_1.fq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/160103_I137_FCH3V5YBBXX_L3_WHPANwalDDAADWAAPEI-101_1.fq.gz | http://owl.fish.washington.edu/Athaliana/20180327_bgi_fastqc/160103_I137_FCH3V5YBBXX_L3_WHPANwalDDAADWAAPEI-101_1_fastqc.html | /Volumes/web/nightingales/P_generosa/160103_I137_FCH3V5YBBXX_L3_WHPANwalDDAADWAAPEI-101_2.fq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/160103_I137_FCH3V5YBBXX_L3_WHPANwalDDAADWAAPEI-101_2.fq.gz | http://owl.fish.washington.edu/Athaliana/20180327_bgi_fastqc/160103_I137_FCH3V5YBBXX_L3_WHPANwalDDAADWAAPEI-101_2_fastqc.html | |||||||||||||
566 | 160103_I137_FCH3V5YBBXX_L4_WHPANwalDDAADWAAPEI-101 | 125 | WHPANwalDDACDTAAPEI_101 | P_generosa | 20160126 | ctenidia, foot | DNA | Illumina | PE50 | genome sequencing | SRP072453 | genome sequencing | /Volumes/web/nightingales/P_generosa/160103_I137_FCH3V5YBBXX_L4_WHPANwalDDAADWAAPEI-101_1.fq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/160103_I137_FCH3V5YBBXX_L4_WHPANwalDDAADWAAPEI-101_1.fq.gz | http://owl.fish.washington.edu/Athaliana/20180327_bgi_fastqc/160103_I137_FCH3V5YBBXX_L4_WHPANwalDDAADWAAPEI-101_1_fastqc.html | /Volumes/web/nightingales/P_generosa/160103_I137_FCH3V5YBBXX_L4_WHPANwalDDAADWAAPEI-101_2.fq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/160103_I137_FCH3V5YBBXX_L4_WHPANwalDDAADWAAPEI-101_2.fq.gz | http://owl.fish.washington.edu/Athaliana/20180327_bgi_fastqc/160103_I137_FCH3V5YBBXX_L4_WHPANwalDDAADWAAPEI-101_2_fastqc.html | |||||||||||||
567 | 160103_I137_FCH3V5YBBXX_L5_WHPANwalDDACDTAAPEI-102 | 126 | WHPANwalDDAADWAAPEI_102 | P_generosa | 20160126 | ctenidia, foot | DNA | Illumina | PE50 | genome sequencing | SRP072453 | genome sequencing | /Volumes/web/nightingales/P_generosa/160103_I137_FCH3V5YBBXX_L5_WHPANwalDDACDTAAPEI-102_1.fq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/160103_I137_FCH3V5YBBXX_L5_WHPANwalDDACDTAAPEI-102_1.fq.gz | http://owl.fish.washington.edu/Athaliana/20180327_bgi_fastqc/160103_I137_FCH3V5YBBXX_L5_WHPANwalDDACDTAAPEI-102_1_fastqc.html | /Volumes/web/nightingales/P_generosa/160103_I137_FCH3V5YBBXX_L5_WHPANwalDDACDTAAPEI-102_2.fq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/160103_I137_FCH3V5YBBXX_L5_WHPANwalDDACDTAAPEI-102_2.fq.gz | http://owl.fish.washington.edu/Athaliana/20180327_bgi_fastqc/160103_I137_FCH3V5YBBXX_L5_WHPANwalDDACDTAAPEI-102_2_fastqc.html | |||||||||||||
568 | 160103_I137_FCH3V5YBBXX_L6_WHPANwalDDACDTAAPEI-102 | 126 | WHPANwalDDAADWAAPEI_102 | P_generosa | 20160126 | ctenidia, foot | DNA | Illumina | PE50 | genome sequencing | SRP072453 | genome sequencing | /Volumes/web/nightingales/P_generosa/160103_I137_FCH3V5YBBXX_L6_WHPANwalDDACDTAAPEI-102_1.fq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/160103_I137_FCH3V5YBBXX_L6_WHPANwalDDACDTAAPEI-102_1.fq.gz | http://owl.fish.washington.edu/Athaliana/20180327_bgi_fastqc/160103_I137_FCH3V5YBBXX_L6_WHPANwalDDACDTAAPEI-102_1_fastqc.html | /Volumes/web/nightingales/P_generosa/160103_I137_FCH3V5YBBXX_L6_WHPANwalDDACDTAAPEI-102_2.fq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/160103_I137_FCH3V5YBBXX_L6_WHPANwalDDACDTAAPEI-102_2.fq.gz | ||||||||||||||
592 | EPI-103_S27_L005 | 145 | HP01-1 | Putnam | https://github.com/hputnam/project_juvenile_geoduck_OA/blob/master/Sample_Processing/20161201_Library_prep_1.csv | P_generosa | 20161220 | 20161229 | DNA | Illumina | PE100 | RRBS | SRR10143626 | https://github.com/hputnam/project_juvenile_geoduck_OA | /Volumes/web/nightingales/P_generosa/EPI-103_S27_L005_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-103_S27_L005_R1_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-103_S27_L005_R1_001_fastqc.html | /Volumes/web/nightingales/P_generosa/EPI-103_S27_L005_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-103_S27_L005_R2_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-103_S27_L005_R2_001_fastqc.html | |||||||||||
593 | EPI-104_S28_L005 | 146 | HP01-1 | Putnam | https://github.com/hputnam/project_juvenile_geoduck_OA/blob/master/Sample_Processing/20161201_Library_prep_1.csv | P_generosa | 20161220 | 20161229 | DNA | Illumina | PE100 | RRBS | SRR10143615 | https://github.com/hputnam/project_juvenile_geoduck_OA | /Volumes/web/nightingales/P_generosa/EPI-104_S28_L005_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-104_S28_L005_R1_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-104_S28_L005_R1_001_fastqc.html | /Volumes/web/nightingales/P_generosa/EPI-104_S28_L005_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-104_S28_L005_R2_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-104_S28_L005_R2_001_fastqc.html | |||||||||||
594 | EPI-111_S29_L005 | 147 | HP01-1 | Putnam | https://github.com/hputnam/project_juvenile_geoduck_OA/blob/master/Sample_Processing/20161201_Library_prep_1.csv | P_generosa | 20161220 | 20161229 | DNA | Illumina | PE100 | RRBS | SRR10143612 | https://github.com/hputnam/project_juvenile_geoduck_OA | /Volumes/web/nightingales/P_generosa/EPI-111_S29_L005_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-111_S29_L005_R1_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-111_S29_L005_R1_001_fastqc.html | /Volumes/web/nightingales/P_generosa/EPI-111_S29_L005_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-111_S29_L005_R2_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-111_S29_L005_R2_001_fastqc.html | |||||||||||
595 | EPI-113_S30_L005 | 148 | HP01-1 | Putnam | https://github.com/hputnam/project_juvenile_geoduck_OA/blob/master/Sample_Processing/20161201_Library_prep_1.csv | P_generosa | 20161220 | 20161229 | DNA | Illumina | PE100 | RRBS | SRR10143611 | https://github.com/hputnam/project_juvenile_geoduck_OA | /Volumes/web/nightingales/P_generosa/EPI-113_S30_L005_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-113_S30_L005_R1_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-113_S30_L005_R1_001_fastqc.html | /Volumes/web/nightingales/P_generosa/EPI-113_S30_L005_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-113_S30_L005_R2_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-113_S30_L005_R2_001_fastqc.html | |||||||||||
596 | EPI-119_S31_L005 | 149 | HP01-1 | Putnam | https://github.com/hputnam/project_juvenile_geoduck_OA/blob/master/Sample_Processing/20161201_Library_prep_1.csv | P_generosa | 20161220 | 20161229 | DNA | Illumina | PE100 | RRBS | SRR10143610 | https://github.com/hputnam/project_juvenile_geoduck_OA | /Volumes/web/nightingales/P_generosa/EPI-119_S31_L005_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-119_S31_L005_R1_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-119_S31_L005_R1_001_fastqc.html | /Volumes/web/nightingales/P_generosa/EPI-119_S31_L005_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-119_S31_L005_R2_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-119_S31_L005_R2_001_fastqc.html | |||||||||||
597 | EPI-120_S32_L005 | 150 | HP01-1 | Putnam | https://github.com/hputnam/project_juvenile_geoduck_OA/blob/master/Sample_Processing/20161201_Library_prep_1.csv | P_generosa | 20161220 | 20161229 | DNA | Illumina | PE100 | RRBS | SRR10143609 | https://github.com/hputnam/project_juvenile_geoduck_OA | /Volumes/web/nightingales/P_generosa/EPI-120_S32_L005_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-120_S32_L005_R1_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-120_S32_L005_R1_001_fastqc.html | /Volumes/web/nightingales/P_generosa/EPI-120_S32_L005_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-120_S32_L005_R2_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-120_S32_L005_R2_001_fastqc.html | |||||||||||
598 | EPI-127_S33_L005 | 151 | HP01-1 | Putnam | https://github.com/hputnam/project_juvenile_geoduck_OA/blob/master/Sample_Processing/20161201_Library_prep_1.csv | P_generosa | 20161220 | 20161229 | DNA | Illumina | PE100 | RRBS | SRR10143658 | https://github.com/hputnam/project_juvenile_geoduck_OA | /Volumes/web/nightingales/P_generosa/EPI-127_S33_L005_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-127_S33_L005_R1_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-127_S33_L005_R1_001_fastqc.html | /Volumes/web/nightingales/P_generosa/EPI-127_S33_L005_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-127_S33_L005_R2_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-127_S33_L005_R2_001_fastqc.html | |||||||||||
599 | EPI-128_S34_L005 | 152 | HP01-1 | Putnam | https://github.com/hputnam/project_juvenile_geoduck_OA/blob/master/Sample_Processing/20161201_Library_prep_1.csv | P_generosa | 20161220 | 20161229 | DNA | Illumina | PE100 | RRBS | SRR10143657 | https://github.com/hputnam/project_juvenile_geoduck_OA | /Volumes/web/nightingales/P_generosa/EPI-128_S34_L005_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-128_S34_L005_R1_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-128_S34_L005_R1_001_fastqc.html | /Volumes/web/nightingales/P_generosa/EPI-128_S34_L005_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-128_S34_L005_R2_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-128_S34_L005_R2_001_fastqc.html | |||||||||||
600 | EPI-135_S35_L005 | 153 | HP01-1 | Putnam | https://github.com/hputnam/project_juvenile_geoduck_OA/blob/master/Sample_Processing/20161201_Library_prep_1.csv | P_generosa | 20161220 | 20161229 | DNA | Illumina | PE100 | RRBS | SRR10143656 | https://github.com/hputnam/project_juvenile_geoduck_OA | /Volumes/web/nightingales/P_generosa/EPI-135_S35_L005_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-135_S35_L005_R1_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-135_S35_L005_R1_001_fastqc.html | /Volumes/web/nightingales/P_generosa/EPI-135_S35_L005_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-135_S35_L005_R2_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-135_S35_L005_R2_001_fastqc.html | |||||||||||
601 | EPI-135WG_S42_L005 | 154 | HP04-5 | Putnam | P_generosa | 20170101 | 20170109 | DNA | Illumina | PE100 | whole genome control sample | https://github.com/hputnam/project_juvenile_geoduck_OA | /Volumes/web/nightingales/P_generosa/EPI-135WG_S42_L005_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-135WG_S42_L005_R1_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-135WG_S42_L005_R1_001_fastqc.html | /Volumes/web/nightingales/P_generosa/EPI-135WG_S42_L005_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-135WG_S42_L005_R2_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-135WG_S42_L005_R2_001_fastqc.html | |||||||||||||
602 | EPI-136_S36_L005 | 155 | HP01-1 | Putnam | https://github.com/hputnam/project_juvenile_geoduck_OA/blob/master/Sample_Processing/20161201_Library_prep_1.csv | P_generosa | 20161220 | 20161229 | DNA | Illumina | PE100 | RRBS | SRR10143655 | https://github.com/hputnam/project_juvenile_geoduck_OA | /Volumes/web/nightingales/P_generosa/EPI-136_S36_L005_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-136_S36_L005_R1_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-136_S36_L005_R1_001_fastqc.html | /Volumes/web/nightingales/P_generosa/EPI-136_S36_L005_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-136_S36_L005_R2_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-136_S36_L005_R2_001_fastqc.html | |||||||||||
603 | EPI-143_S37_L005 | 156 | HP01-1 | Putnam | https://github.com/hputnam/project_juvenile_geoduck_OA/blob/master/Sample_Processing/20161201_Library_prep_1.csv | P_generosa | 20161220 | 20161229 | DNA | Illumina | PE100 | RRBS | SRR10143654 | https://github.com/hputnam/project_juvenile_geoduck_OA | /Volumes/web/nightingales/P_generosa/EPI-143_S37_L005_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-143_S37_L005_R1_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-143_S37_L005_R1_001_fastqc.html | /Volumes/web/nightingales/P_generosa/EPI-143_S37_L005_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-143_S37_L005_R2_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-143_S37_L005_R2_001_fastqc.html | |||||||||||
604 | EPI-145_S38_L005 | 157 | HP01-1 | Putnam | https://github.com/hputnam/project_juvenile_geoduck_OA/blob/master/Sample_Processing/20161206_Library_prep_2.csv | P_generosa | 20161220 | 20161229 | DNA | Illumina | PE100 | RRBS | SRR10143653 | https://github.com/hputnam/project_juvenile_geoduck_OA | /Volumes/web/nightingales/P_generosa/EPI-145_S38_L005_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-145_S38_L005_R1_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-145_S38_L005_R1_001_fastqc.html | /Volumes/web/nightingales/P_generosa/EPI-145_S38_L005_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-145_S38_L005_R2_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-145_S38_L005_R2_001_fastqc.html | |||||||||||
605 | EPI-151_S2_L002 | 158 | HP01-2 | Putnam | https://github.com/hputnam/project_juvenile_geoduck_OA/blob/master/Sample_Processing/20161206_Library_prep_2.csv | P_generosa | 20170101 | 20170109 | DNA | Illumina | PE100 | RRBS | SRR10143652 | https://github.com/hputnam/project_juvenile_geoduck_OA | /Volumes/web/nightingales/P_generosa/EPI-151_S2_L002_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-151_S2_L002_R1_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-151_S2_L002_R1_001_fastqc.html | /Volumes/web/nightingales/P_generosa/EPI-151_S2_L002_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-151_S2_L002_R2_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-151_S2_L002_R2_001_fastqc.html | |||||||||||
606 | EPI-152_S3_L002 | 159 | HP01-2 | Putnam | https://github.com/hputnam/project_juvenile_geoduck_OA/blob/master/Sample_Processing/20161206_Library_prep_2.csv | P_generosa | 20170101 | 20170109 | DNA | Illumina | PE100 | RRBS | SRR10143651 | https://github.com/hputnam/project_juvenile_geoduck_OA | /Volumes/web/nightingales/P_generosa/EPI-152_S3_L002_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-152_S3_L002_R1_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-152_S3_L002_R1_001_fastqc.html | /Volumes/web/nightingales/P_generosa/EPI-152_S3_L002_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-152_S3_L002_R2_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-152_S3_L002_R2_001_fastqc.html | |||||||||||
607 | EPI-153_S4_L002 | 160 | HP01-2 | Putnam | https://github.com/hputnam/project_juvenile_geoduck_OA/blob/master/Sample_Processing/20161206_Library_prep_2.csv | P_generosa | 20170101 | 20170109 | DNA | Illumina | PE100 | RRBS | SRR10143650 | https://github.com/hputnam/project_juvenile_geoduck_OA | /Volumes/web/nightingales/P_generosa/EPI-153_S4_L002_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-153_S4_L002_R1_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-153_S4_L002_R1_001_fastqc.html | /Volumes/web/nightingales/P_generosa/EPI-153_S4_L002_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-153_S4_L002_R2_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-153_S4_L002_R2_001_fastqc.html | |||||||||||
608 | EPI-154_S5_L002 | 161 | HP01-2 | Putnam | https://github.com/hputnam/project_juvenile_geoduck_OA/blob/master/Sample_Processing/20161206_Library_prep_2.csv | P_generosa | 20170101 | 20170109 | DNA | Illumina | PE100 | RRBS | SRR10143649 | https://github.com/hputnam/project_juvenile_geoduck_OA | /Volumes/web/nightingales/P_generosa/EPI-154_S5_L002_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-154_S5_L002_R1_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-154_S5_L002_R1_001_fastqc.html | /Volumes/web/nightingales/P_generosa/EPI-154_S5_L002_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-154_S5_L002_R2_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-154_S5_L002_R2_001_fastqc.html | |||||||||||
609 | EPI-159_S6_L002 | 162 | HP01-2 | Putnam | https://github.com/hputnam/project_juvenile_geoduck_OA/blob/master/Sample_Processing/20161206_Library_prep_2.csv | P_generosa | 20170101 | 20170109 | DNA | Illumina | PE100 | RRBS | SRR10143647 | https://github.com/hputnam/project_juvenile_geoduck_OA | /Volumes/web/nightingales/P_generosa/EPI-159_S6_L002_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-159_S6_L002_R1_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-159_S6_L002_R1_001_fastqc.html | /Volumes/web/nightingales/P_generosa/EPI-159_S6_L002_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-159_S6_L002_R2_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-159_S6_L002_R2_001_fastqc.html | |||||||||||
610 | EPI-160_S7_L002 | 163 | HP01-2 | Putnam | https://github.com/hputnam/project_juvenile_geoduck_OA/blob/master/Sample_Processing/20161206_Library_prep_2.csv | P_generosa | 20170101 | 20170109 | DNA | Illumina | PE100 | RRBS | SRR10143646 | https://github.com/hputnam/project_juvenile_geoduck_OA | /Volumes/web/nightingales/P_generosa/EPI-160_S7_L002_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-160_S7_L002_R1_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-160_S7_L002_R1_001_fastqc.html | /Volumes/web/nightingales/P_generosa/EPI-160_S7_L002_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-160_S7_L002_R2_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-160_S7_L002_R2_001_fastqc.html | |||||||||||
611 | EPI-161_S8_L002 | 164 | HP01-2 | Putnam | https://github.com/hputnam/project_juvenile_geoduck_OA/blob/master/Sample_Processing/20161206_Library_prep_2.csv | P_generosa | 20170101 | 20170109 | DNA | Illumina | PE100 | RRBS | SRR10143645 | https://github.com/hputnam/project_juvenile_geoduck_OA | /Volumes/web/nightingales/P_generosa/EPI-161_S8_L002_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-161_S8_L002_R1_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-161_S8_L002_R1_001_fastqc.html | /Volumes/web/nightingales/P_generosa/EPI-161_S8_L002_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-161_S8_L002_R2_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-161_S8_L002_R2_001_fastqc.html | |||||||||||
612 | EPI-162_S9_L002 | 165 | HP01-2 | Putnam | https://github.com/hputnam/project_juvenile_geoduck_OA/blob/master/Sample_Processing/20161206_Library_prep_2.csv | P_generosa | 20170101 | 20170109 | DNA | Illumina | PE100 | RRBS | SRR10143644 | https://github.com/hputnam/project_juvenile_geoduck_OA | /Volumes/web/nightingales/P_generosa/EPI-162_S9_L002_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-162_S9_L002_R1_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-162_S9_L002_R1_001_fastqc.html | /Volumes/web/nightingales/P_generosa/EPI-162_S9_L002_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-162_S9_L002_R2_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-162_S9_L002_R2_001_fastqc.html | |||||||||||
613 | EPI-167_S10_L002 | 166 | HP01-2 | Putnam | https://github.com/hputnam/project_juvenile_geoduck_OA/blob/master/Sample_Processing/20161206_Library_prep_2.csv | P_generosa | 20170101 | 20170109 | DNA | Illumina | PE100 | RRBS | SRR10143643 | https://github.com/hputnam/project_juvenile_geoduck_OA | /Volumes/web/nightingales/P_generosa/EPI-167_S10_L002_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-167_S10_L002_R1_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-167_S10_L002_R1_001_fastqc.html | /Volumes/web/nightingales/P_generosa/EPI-167_S10_L002_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-167_S10_L002_R2_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-167_S10_L002_R2_001_fastqc.html | |||||||||||
614 | EPI-168_S11_L002 | 167 | HP01-2 | Putnam | https://github.com/hputnam/project_juvenile_geoduck_OA/blob/master/Sample_Processing/20161206_Library_prep_2.csv | P_generosa | 20170101 | 20170109 | DNA | Illumina | PE100 | RRBS | SRR10143642 | https://github.com/hputnam/project_juvenile_geoduck_OA | /Volumes/web/nightingales/P_generosa/EPI-168_S11_L002_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-168_S11_L002_R1_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-168_S11_L002_R1_001_fastqc.html | /Volumes/web/nightingales/P_generosa/EPI-168_S11_L002_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-168_S11_L002_R2_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-168_S11_L002_R2_001_fastqc.html | |||||||||||
615 | EPI-169_S12_L002 | 168 | HP01-2 | Putnam | https://github.com/hputnam/project_juvenile_geoduck_OA/blob/master/Sample_Processing/20161206_Library_prep_2.csv | P_generosa | 20170101 | 20170109 | DNA | Illumina | PE100 | RRBS | SRR10143641 | https://github.com/hputnam/project_juvenile_geoduck_OA | /Volumes/web/nightingales/P_generosa/EPI-169_S12_L002_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-169_S12_L002_R1_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-169_S12_L002_R1_001_fastqc.html | /Volumes/web/nightingales/P_generosa/EPI-169_S12_L002_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-169_S12_L002_R2_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-169_S12_L002_R2_001_fastqc.html | |||||||||||
616 | EPI-170_S13_L002 | 169 | HP01-2 | Putnam | https://github.com/hputnam/project_juvenile_geoduck_OA/blob/master/Sample_Processing/20161206_Library_prep_2.csv | P_generosa | 20170101 | 20170109 | DNA | Illumina | PE100 | RRBS | SRR10143640 | https://github.com/hputnam/project_juvenile_geoduck_OA | /Volumes/web/nightingales/P_generosa/EPI-170_S13_L002_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-170_S13_L002_R1_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-170_S13_L002_R1_001_fastqc.html | /Volumes/web/nightingales/P_generosa/EPI-170_S13_L002_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-170_S13_L002_R2_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-170_S13_L002_R2_001_fastqc.html | |||||||||||
617 | EPI-175_S14_L003 | 170 | HP02-3 | Putnam | https://github.com/hputnam/project_juvenile_geoduck_OA/blob/master/Sample_Processing/20161206_Library_prep_2.csv | P_generosa | 20170101 | 20170109 | DNA | Illumina | PE100 | RRBS | SRR10143639 | https://github.com/hputnam/project_juvenile_geoduck_OA | /Volumes/web/nightingales/P_generosa/EPI-175_S14_L003_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-175_S14_L003_R1_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-175_S14_L003_R1_001_fastqc.html | /Volumes/web/nightingales/P_generosa/EPI-175_S14_L003_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-175_S14_L003_R2_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-175_S14_L003_R2_001_fastqc.html | |||||||||||
618 | EPI-176_S15_L003 | 171 | HP02-3 | Putnam | https://github.com/hputnam/project_juvenile_geoduck_OA/blob/master/Sample_Processing/20161206_Library_prep_2.csv | P_generosa | 20170101 | 20170109 | DNA | Illumina | PE100 | RRBS | SRR10143638 | https://github.com/hputnam/project_juvenile_geoduck_OA | /Volumes/web/nightingales/P_generosa/EPI-176_S15_L003_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-176_S15_L003_R1_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-176_S15_L003_R1_001_fastqc.html | /Volumes/web/nightingales/P_generosa/EPI-176_S15_L003_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-176_S15_L003_R2_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-176_S15_L003_R2_001_fastqc.html | |||||||||||
619 | EPI-181_S16_L003 | 172 | HP02-3 | Putnam | https://github.com/hputnam/project_juvenile_geoduck_OA/blob/master/Sample_Processing/20161206_Library_prep_2.csv | P_generosa | 20170101 | 20170109 | DNA | Illumina | PE100 | RRBS | SRR10143636 | https://github.com/hputnam/project_juvenile_geoduck_OA | /Volumes/web/nightingales/P_generosa/EPI-181_S16_L003_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-181_S16_L003_R1_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-181_S16_L003_R1_001_fastqc.html | /Volumes/web/nightingales/P_generosa/EPI-181_S16_L003_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-181_S16_L003_R2_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-181_S16_L003_R2_001_fastqc.html | |||||||||||
620 | EPI-182_S17_L003 | 173 | HP02-3 | Putnam | https://github.com/hputnam/project_juvenile_geoduck_OA/blob/master/Sample_Processing/20161206_Library_prep_2.csv | P_generosa | 20170101 | 20170109 | DNA | Illumina | PE100 | RRBS | SRR10143635 | https://github.com/hputnam/project_juvenile_geoduck_OA | /Volumes/web/nightingales/P_generosa/EPI-182_S17_L003_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-182_S17_L003_R1_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-182_S17_L003_R1_001_fastqc.html | /Volumes/web/nightingales/P_generosa/EPI-182_S17_L003_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-182_S17_L003_R2_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-182_S17_L003_R2_001_fastqc.html | |||||||||||
621 | EPI-184_S18_L003 | 174 | HP02-3 | Putnam | https://github.com/hputnam/project_juvenile_geoduck_OA/blob/master/Sample_Processing/20161206_Library_prep_2.csv | P_generosa | 20170101 | 20170109 | DNA | Illumina | PE100 | RRBS | SRR10143634 | https://github.com/hputnam/project_juvenile_geoduck_OA | /Volumes/web/nightingales/P_generosa/EPI-184_S18_L003_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-184_S18_L003_R1_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-184_S18_L003_R1_001_fastqc.html | /Volumes/web/nightingales/P_generosa/EPI-184_S18_L003_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-184_S18_L003_R2_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-184_S18_L003_R2_001_fastqc.html | |||||||||||
622 | EPI-185_S19_L003 | 175 | HP02-3 | Putnam | https://github.com/hputnam/project_juvenile_geoduck_OA/blob/master/Sample_Processing/20161206_Library_prep_2.csv | P_generosa | 20170101 | 20170109 | DNA | Illumina | PE100 | RRBS | SRR10143633 | https://github.com/hputnam/project_juvenile_geoduck_OA | /Volumes/web/nightingales/P_generosa/EPI-185_S19_L003_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-185_S19_L003_R1_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-185_S19_L003_R1_001_fastqc.html | /Volumes/web/nightingales/P_generosa/EPI-185_S19_L003_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-185_S19_L003_R2_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-185_S19_L003_R2_001_fastqc.html | |||||||||||
623 | EPI-187_S20_L003 | 176 | HP02-3 | Putnam | https://github.com/hputnam/project_juvenile_geoduck_OA/blob/master/Sample_Processing/20161206_Library_prep_2.csv | P_generosa | 20170101 | 20170109 | DNA | Illumina | PE100 | RRBS | SRR10143632 | https://github.com/hputnam/project_juvenile_geoduck_OA | /Volumes/web/nightingales/P_generosa/EPI-187_S20_L003_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-187_S20_L003_R1_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-187_S20_L003_R1_001_fastqc.html | /Volumes/web/nightingales/P_generosa/EPI-187_S20_L003_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-187_S20_L003_R2_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-187_S20_L003_R2_001_fastqc.html | |||||||||||
624 | EPI-188_S21_L003 | 177 | HP02-3 | Putnam | https://github.com/hputnam/project_juvenile_geoduck_OA/blob/master/Sample_Processing/20161206_Library_prep_2.csv | P_generosa | 20170101 | 20170109 | DNA | Illumina | PE100 | RRBS | SRR10143631 | https://github.com/hputnam/project_juvenile_geoduck_OA | /Volumes/web/nightingales/P_generosa/EPI-188_S21_L003_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-188_S21_L003_R1_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-188_S21_L003_R1_001_fastqc.html | /Volumes/web/nightingales/P_generosa/EPI-188_S21_L003_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-188_S21_L003_R2_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-188_S21_L003_R2_001_fastqc.html | |||||||||||
625 | EPI-193_S22_L003 | 178 | HP02-3 | Putnam | https://github.com/hputnam/project_juvenile_geoduck_OA/blob/master/Sample_Processing/20161206_Library_prep_2.csv | P_generosa | 20170101 | 20170109 | DNA | Illumina | PE100 | RRBS | SRR10143630 | https://github.com/hputnam/project_juvenile_geoduck_OA | /Volumes/web/nightingales/P_generosa/EPI-193_S22_L003_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-193_S22_L003_R1_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-193_S22_L003_R1_001_fastqc.html | /Volumes/web/nightingales/P_generosa/EPI-193_S22_L003_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-193_S22_L003_R2_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-193_S22_L003_R2_001_fastqc.html | |||||||||||
626 | EPI-194_S23_L003 | 179 | HP02-3 | Putnam | https://github.com/hputnam/project_juvenile_geoduck_OA/blob/master/Sample_Processing/20161206_Library_prep_2.csv | P_generosa | 20170101 | 20170109 | DNA | Illumina | PE100 | RRBS | SRR10143629 | https://github.com/hputnam/project_juvenile_geoduck_OA | /Volumes/web/nightingales/P_generosa/EPI-194_S23_L003_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-194_S23_L003_R1_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-194_S23_L003_R1_001_fastqc.html | /Volumes/web/nightingales/P_generosa/EPI-194_S23_L003_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-194_S23_L003_R2_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-194_S23_L003_R2_001_fastqc.html | |||||||||||
627 | EPI-199_S24_L003 | 180 | HP02-3 | Putnam | https://github.com/hputnam/project_juvenile_geoduck_OA/blob/master/Sample_Processing/20161206_Library_prep_2.csv | P_generosa | 20170101 | 20170109 | DNA | Illumina | PE100 | RRBS | SRR10143628 | https://github.com/hputnam/project_juvenile_geoduck_OA | /Volumes/web/nightingales/P_generosa/EPI-199_S24_L003_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-199_S24_L003_R1_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-199_S24_L003_R1_001_fastqc.html | /Volumes/web/nightingales/P_generosa/EPI-199_S24_L003_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-199_S24_L003_R2_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-199_S24_L003_R2_001_fastqc.html | |||||||||||
628 | EPI-200_S25_L003 | 181 | HP02-3 | Putnam | https://github.com/hputnam/project_juvenile_geoduck_OA/blob/master/Sample_Processing/20161206_Library_prep_2.csv | P_generosa | 20170101 | 20170109 | DNA | Illumina | PE100 | RRBS | SRR10143627 | https://github.com/hputnam/project_juvenile_geoduck_OA | /Volumes/web/nightingales/P_generosa/EPI-200_S25_L003_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-200_S25_L003_R1_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-200_S25_L003_R1_001_fastqc.html | /Volumes/web/nightingales/P_generosa/EPI-200_S25_L003_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-200_S25_L003_R2_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-200_S25_L003_R2_001_fastqc.html | |||||||||||
629 | EPI-205_S26_L004 | 182 | HP03-4 | Putnam | https://github.com/hputnam/project_juvenile_geoduck_OA/blob/master/Sample_Processing/20161206_Library_prep_2.csv | P_generosa | 20170101 | 20170109 | DNA | Illumina | PE100 | RRBS | SRR10143625 | https://github.com/hputnam/project_juvenile_geoduck_OA | /Volumes/web/nightingales/P_generosa/EPI-205_S26_L004_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-205_S26_L004_R1_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-205_S26_L004_R1_001_fastqc.html | /Volumes/web/nightingales/P_generosa/EPI-205_S26_L004_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-205_S26_L004_R2_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-205_S26_L004_R2_001_fastqc.html | |||||||||||
630 | EPI-206_S27_L004 | 183 | HP03-4 | Putnam | https://github.com/hputnam/project_juvenile_geoduck_OA/blob/master/Sample_Processing/20161206_Library_prep_2.csv | P_generosa | 20170101 | 20170109 | DNA | Illumina | PE100 | RRBS | SRR10143624 | https://github.com/hputnam/project_juvenile_geoduck_OA | /Volumes/web/nightingales/P_generosa/EPI-206_S27_L004_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-206_S27_L004_R1_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-206_S27_L004_R1_001_fastqc.html | /Volumes/web/nightingales/P_generosa/EPI-206_S27_L004_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-206_S27_L004_R2_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-206_S27_L004_R2_001_fastqc.html | |||||||||||
631 | EPI-208_S28_L004 | 184 | HP03-4 | Putnam | https://github.com/hputnam/project_juvenile_geoduck_OA/blob/master/Sample_Processing/20161206_Library_prep_2.csv | P_generosa | 20170101 | 20170109 | DNA | Illumina | PE100 | RRBS | SRR10143623 | https://github.com/hputnam/project_juvenile_geoduck_OA | /Volumes/web/nightingales/P_generosa/EPI-208_S28_L004_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-208_S28_L004_R1_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-208_S28_L004_R1_001_fastqc.html | /Volumes/web/nightingales/P_generosa/EPI-208_S28_L004_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-208_S28_L004_R2_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-208_S28_L004_R2_001_fastqc.html | |||||||||||
632 | EPI-209_S29_L004 | 185 | HP03-4 | Putnam | https://github.com/hputnam/project_juvenile_geoduck_OA/blob/master/Sample_Processing/20161206_Library_prep_2.csv | P_generosa | 20170101 | 20170109 | DNA | Illumina | PE100 | RRBS | SRR10143622 | https://github.com/hputnam/project_juvenile_geoduck_OA | /Volumes/web/nightingales/P_generosa/EPI-209_S29_L004_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-209_S29_L004_R1_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-209_S29_L004_R1_001_fastqc.html | /Volumes/web/nightingales/P_generosa/EPI-209_S29_L004_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-209_S29_L004_R2_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-209_S29_L004_R2_001_fastqc.html | |||||||||||
633 | EPI-214_S30_L004 | 186 | HP03-4 | Putnam | https://github.com/hputnam/project_juvenile_geoduck_OA/blob/master/Sample_Processing/20161206_Library_prep_2.csv | P_generosa | 20170101 | 20170109 | DNA | Illumina | PE100 | RRBS | SRR10143621 | https://github.com/hputnam/project_juvenile_geoduck_OA | /Volumes/web/nightingales/P_generosa/EPI-214_S30_L004_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-214_S30_L004_R1_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-214_S30_L004_R1_001_fastqc.html | /Volumes/web/nightingales/P_generosa/EPI-214_S30_L004_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-214_S30_L004_R2_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-214_S30_L004_R2_001_fastqc.html | |||||||||||
634 | EPI-215_S31_L004 | 187 | HP03-4 | Putnam | https://github.com/hputnam/project_juvenile_geoduck_OA/blob/master/Sample_Processing/20161206_Library_prep_2.csv | P_generosa | 20170101 | 20170109 | DNA | Illumina | PE100 | RRBS | SRR10143620 | https://github.com/hputnam/project_juvenile_geoduck_OA | /Volumes/web/nightingales/P_generosa/EPI-215_S31_L004_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-215_S31_L004_R1_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-215_S31_L004_R1_001_fastqc.html | /Volumes/web/nightingales/P_generosa/EPI-215_S31_L004_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-215_S31_L004_R2_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-215_S31_L004_R2_001_fastqc.html | |||||||||||
635 | EPI-227_S35_L004 | 188 | HP03-4 | Putnam | https://github.com/hputnam/project_juvenile_geoduck_OA/blob/master/Sample_Processing/20161206_Library_prep_2.csv | P_generosa | 20170101 | 20170109 | DNA | Illumina | PE100 | RRBS | SRR10143616 | https://github.com/hputnam/project_juvenile_geoduck_OA | /Volumes/web/nightingales/P_generosa/EPI-227_S35_L004_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-227_S35_L004_R1_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-227_S35_L004_R1_001_fastqc.html | /Volumes/web/nightingales/P_generosa/EPI-227_S35_L004_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-227_S35_L004_R2_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-227_S35_L004_R2_001_fastqc.html | |||||||||||
636 | EPI-230_S37_L004 | 190 | HP03-4 | Putnam | https://github.com/hputnam/project_juvenile_geoduck_OA/blob/master/Sample_Processing/20161206_Library_prep_2.csv | P_generosa | 20170101 | 20170109 | DNA | Illumina | PE100 | RRBS | SRR10143613 | https://github.com/hputnam/project_juvenile_geoduck_OA | /Volumes/web/nightingales/P_generosa/EPI-230_S37_L004_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-230_S37_L004_R1_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-230_S37_L004_R1_001_fastqc.html | /Volumes/web/nightingales/P_generosa/EPI-230_S37_L004_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-230_S37_L004_R2_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-230_S37_L004_R2_001_fastqc.html | |||||||||||
637 | EPI-41_S38_L005 | 191 | HP04-5 | Putnam | https://github.com/hputnam/project_juvenile_geoduck_OA/blob/master/Sample_Processing/20161206_Library_prep_2.csv | P_generosa | 20161220 | 20170109 | DNA | Illumina | PE100 | RRBS | SRR10143660 | https://github.com/hputnam/project_juvenile_geoduck_OA | /Volumes/web/nightingales/P_generosa/EPI-41_S38_L005_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-41_S38_L005_R1_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-41_S38_L005_R1_001_fastqc.html | /Volumes/web/nightingales/P_generosa/EPI-41_S38_L005_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-41_S38_L005_R2_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-41_S38_L005_R2_001_fastqc.html | |||||||||||
638 | EPI-42_S39_L005 | 192 | HP04-5 | Putnam | https://github.com/hputnam/project_juvenile_geoduck_OA/blob/master/Sample_Processing/20161206_Library_prep_2.csv | P_generosa | 20170101 | 20170109 | DNA | Illumina | PE100 | RRBS | SRR10143659 | https://github.com/hputnam/project_juvenile_geoduck_OA | /Volumes/web/nightingales/P_generosa/EPI-42_S39_L005_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-42_S39_L005_R1_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-42_S39_L005_R1_001_fastqc.html | /Volumes/web/nightingales/P_generosa/EPI-42_S39_L005_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-42_S39_L005_R2_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-42_S39_L005_R2_001_fastqc.html | |||||||||||
639 | EPI-43_S40_L005 | 193 | HP04-5 | Putnam | https://github.com/hputnam/project_juvenile_geoduck_OA/blob/master/Sample_Processing/20161206_Library_prep_2.csv | P_generosa | 20170101 | 20170109 | DNA | Illumina | PE100 | RRBS | SRR10143648 | https://github.com/hputnam/project_juvenile_geoduck_OA | /Volumes/web/nightingales/P_generosa/EPI-43_S40_L005_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-43_S40_L005_R1_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-43_S40_L005_R1_001_fastqc.html | /Volumes/web/nightingales/P_generosa/EPI-43_S40_L005_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-43_S40_L005_R2_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-43_S40_L005_R2_001_fastqc.html | |||||||||||
640 | EPI-44_S41_L005 | 194 | HP04-5 | Putnam | https://github.com/hputnam/project_juvenile_geoduck_OA/blob/master/Sample_Processing/20161206_Library_prep_2.csv | P_generosa | 20170101 | 20170109 | DNA | Illumina | PE100 | RRBS | SRR10143637 | https://github.com/hputnam/project_juvenile_geoduck_OA | /Volumes/web/nightingales/P_generosa/EPI-44_S41_L005_R1_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-44_S41_L005_R1_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-44_S41_L005_R1_001_fastqc.html | /Volumes/web/nightingales/P_generosa/EPI-44_S41_L005_R2_001.fastq.gz | http://owl.fish.washington.edu/nightingales/P_generosa/EPI-44_S41_L005_R2_001.fastq.gz | http://owl.fish.washington.edu/Athaliana/20180516_geoduck_EPI_fastqc/EPI-44_S41_L005_R2_001_fastqc.html | |||||||||||
714 | filtered_BS_CgF_TTAGGC_L004 | BS CgF | C_gigas | 20130826 | 20130924 | eggs | DNA | Illumina | PE72 | BS-seq | /Volumes/web/nightingales/C_gigas/filtered_BS_CgF_TTAGGC_L004_R1.fastq.gz | http://owl.fish.washington.edu/nightingales/C_gigas/filtered_BS_CgF_TTAGGC_L004_R1.fastq.gz | /Volumes/web/nightingales/C_gigas/filtered_BS_CgF_TTAGGC_L004_R2.fastq.gz | http://owl.fish.washington.edu/nightingales/C_gigas/filtered_BS_CgF_TTAGGC_L004_R2.fastq.gz | |||||||||||||||||
715 | filtered_BS_CgF_TTAGGC_L007 | BS CgF | C_gigas | 20130826 | 20131217 | eggs | DNA | Illumina | PE72 | BS-seq | /Volumes/web/nightingales/C_gigas/filtered_BS_CgF_TTAGGC_L007_R1.fastq.gz | http://owl.fish.washington.edu/nightingales/C_gigas/filtered_BS_CgF_TTAGGC_L007_R1.fastq.gz | /Volumes/web/nightingales/C_gigas/filtered_BS_CgF_TTAGGC_L007_R2.fastq.gz | http://owl.fish.washington.edu/nightingales/C_gigas/filtered_BS_CgF_TTAGGC_L007_R2.fastq.gz | |||||||||||||||||
716 | filtered_BS_CgLarv_T1D3_TGACCA_L004 | BS CgLarv T1D3 | C_gigas | 20130826 | 20130924 | larvae | DNA | Illumina | PE72 | BS-seq | /Volumes/web/nightingales/C_gigas/filtered_BS_CgLarv_T1D3_TGACCA_L004_R1.fastq.gz | http://owl.fish.washington.edu/nightingales/C_gigas/filtered_BS_CgLarv_T1D3_TGACCA_L004_R1.fastq.gz | /Volumes/web/nightingales/C_gigas/filtered_BS_CgLarv_T1D3_TGACCA_L004_R2.fastq.gz | http://owl.fish.washington.edu/nightingales/C_gigas/filtered_BS_CgLarv_T1D3_TGACCA_L004_R2.fastq.gz | |||||||||||||||||
723 | filtered_BS_CgLarv_T1D3_TGACCA_L007 | BS CgLarv T1D3 | C_gigas | 20130826 | 20131217 | larvae | DNA | Illumina | PE72 | BS-seq | /Volumes/web/nightingales/C_gigas/filtered_BS_CgLarv_T1D3_TGACCA_L007_R1.fastq.gz | http://owl.fish.washington.edu/nightingales/C_gigas/filtered_BS_CgLarv_T1D3_TGACCA_L007_R1.fastq.gz | /Volumes/web/nightingales/C_gigas/filtered_BS_CgLarv_T1D3_TGACCA_L007_R2.fastq.gz | http://owl.fish.washington.edu/nightingales/C_gigas/filtered_BS_CgLarv_T1D3_TGACCA_L007_R2.fastq.gz | |||||||||||||||||
748 | filtered_BS_CgLarv_T1D5_ACAGTG_L004 | BS CgLarv T1D5 | C_gigas | 20130826 | 20130924 | larvae | DNA | Illumina | PE72 | BS-seq | /Volumes/web/nightingales/C_gigas/filtered_BS_CgLarv_T1D5_ACAGTG_L004_R1.fastq.gz | http://owl.fish.washington.edu/nightingales/C_gigas/filtered_BS_CgLarv_T1D5_ACAGTG_L004_R1.fastq.gz | /Volumes/web/nightingales/C_gigas/filtered_BS_CgLarv_T1D5_ACAGTG_L004_R2.fastq.gz | http://owl.fish.washington.edu/nightingales/C_gigas/filtered_BS_CgLarv_T1D5_ACAGTG_L004_R2.fastq.gz | |||||||||||||||||
749 | filtered_BS_CgLarv_T1D5_ACAGTG_L007 | BS CgLarv T1D5 | C_gigas | 20130826 | 20131217 | larvae | DNA | Illumina | PE72 | BS-seq | /Volumes/web/nightingales/C_gigas/filtered_BS_CgLarv_T1D5_ACAGTG_L007_R1.fastq.gz | http://owl.fish.washington.edu/nightingales/C_gigas/filtered_BS_CgLarv_T1D5_ACAGTG_L007_R1.fastq.gz | /Volumes/web/nightingales/C_gigas/filtered_BS_CgLarv_T1D5_ACAGTG_L007_R2.fastq.gz | http://owl.fish.washington.edu/nightingales/C_gigas/filtered_BS_CgLarv_T1D5_ACAGTG_L007_R2.fastq.gz | |||||||||||||||||
750 | filtered_BS_CgLarv_T3D5_CAGATC_L004 | BS CgLarv T3D3 | C_gigas | 20130826 | 20130924 | larvae | DNA | Illumina | PE72 | BS-seq | /Volumes/web/nightingales/C_gigas/filtered_BS_CgLarv_T3D5_CAGATC_L004_R1.fastq.gz | http://owl.fish.washington.edu/nightingales/C_gigas/filtered_BS_CgLarv_T3D5_CAGATC_L004_R1.fastq.gz | /Volumes/web/nightingales/C_gigas/filtered_BS_CgLarv_T3D5_CAGATC_L004_R2.fastq.gz | http://owl.fish.washington.edu/nightingales/C_gigas/filtered_BS_CgLarv_T3D5_CAGATC_L004_R2.fastq.gz | |||||||||||||||||
752 | filtered_BS_CgLarv_T3D5_CAGATC_L007 | BS CgLarv T3D3 | C_gigas | 20130826 | 20131217 | larvae | DNA | Illumina | PE72 | BS-seq | /Volumes/web/nightingales/C_gigas/filtered_BS_CgLarv_T3D5_CAGATC_L007_R1.fastq.gz | http://owl.fish.washington.edu/nightingales/C_gigas/filtered_BS_CgLarv_T3D5_CAGATC_L007_R1.fastq.gz | /Volumes/web/nightingales/C_gigas/filtered_BS_CgLarv_T3D5_CAGATC_L007_R2.fastq.gz | http://owl.fish.washington.edu/nightingales/C_gigas/filtered_BS_CgLarv_T3D5_CAGATC_L007_R2.fastq.gz | |||||||||||||||||
753 | filtered_Bs_Cglarve_T3D3_GCCAAT_L004 | BS CgLarv T3D5 | C_gigas | 20130826 | 20130924 | larvae | DNA | Illumina | PE72 | BS-seq | /Volumes/web/nightingales/C_gigas/filtered_Bs_CgLarve_T3D3_GCCAAT_L004_R1.fastq.gz | http://owl.fish.washington.edu/nightingales/C_gigas/filtered_Bs_CgLarve_T3D3_GCCAAT_L004_R1.fastq.gz | /Volumes/web/nightingales/C_gigas/filtered_Bs_CgLarve_T3D3_GCCAAT_L004_R2.fastq.gz | http://owl.fish.washington.edu/nightingales/C_gigas/filtered_Bs_CgLarve_T3D3_GCCAAT_L004_R2.fastq.gz | |||||||||||||||||
754 | filtered_Bs_Cglarve_T3D3_GCCAAT_L007 | BS CgLarv T3D5 | C_gigas | 20130826 | 20131217 | larvae | DNA | Illumina | PE72 | BS-seq | /Volumes/web/nightingales/C_gigas/filtered_Bs_CgLarve_T3D3_GCCAAT_L007_R1.fastq.gz | http://owl.fish.washington.edu/nightingales/C_gigas/filtered_Bs_CgLarve_T3D3_GCCAAT_L007_R1.fastq.gz | /Volumes/web/nightingales/C_gigas/filtered_Bs_CgLarve_T3D3_GCCAAT_L007_R2.fastq.gz | http://owl.fish.washington.edu/nightingales/C_gigas/filtered_Bs_CgLarve_T3D3_GCCAAT_L007_R2.fastq.gz | |||||||||||||||||
755 | filtered_BS_CgM1_ACTTGA_L004 | BS CgM1 | C_gigas | 20130826 | 20130924 | sperm | DNA | Illumina | PE72 | BS-seq | /Volumes/web/nightingales/C_gigas/filtered_BS_CgM1_ACTTGA_L004_R1.fastq.gz | http://owl.fish.washington.edu/nightingales/C_gigas/filtered_BS_CgM1_ACTTGA_L004_R1.fastq.gz | /Volumes/web/nightingales/C_gigas/filtered_BS_CgM1_ACTTGA_L004_R2.fastq.gz | http://owl.fish.washington.edu/nightingales/C_gigas/filtered_BS_CgM1_ACTTGA_L004_R2.fastq.gz | |||||||||||||||||
756 | filtered_BS_CgM1_ACTTGA_L007 | BS CgM1 | C_gigas | 20130826 | 20131217 | sperm | DNA | Illumina | PE72 | BS-seq | /Volumes/web/nightingales/C_gigas/filtered_BS_CgM1_ACTTGA_L007_R1.fastq.gz | http://owl.fish.washington.edu/nightingales/C_gigas/filtered_BS_CgM1_ACTTGA_L007_R1.fastq.gz | /Volumes/web/nightingales/C_gigas/filtered_BS_CgM1_ACTTGA_L007_R2.fastq.gz | http://owl.fish.washington.edu/nightingales/C_gigas/filtered_BS_CgM1_ACTTGA_L007_R2.fastq.gz |