Comments on: Genome Assembly – Olympia Oyster Illumina & PacBio Using PB Jelly w/BGI Scaffold Assembly http://onsnetwork.org/kubu4/2017/11/14/genome-assembly-olympia-oyster-illumina-pacbio-using-pb-jelly-wbgi-scaffold-assembly/ University of Washington - Fishery Sciences - Roberts Lab Tue, 09 Apr 2019 18:37:58 +0000 hourly 1 http://wordpress.org/?v=4.0 By: Troubleshooting – PB Jelly Install on Emu | Sam's Notebook http://onsnetwork.org/kubu4/2017/11/14/genome-assembly-olympia-oyster-illumina-pacbio-using-pb-jelly-wbgi-scaffold-assembly/#comment-5780 Tue, 21 Nov 2017 00:12:13 +0000 http://onsnetwork.org/kubu4/?p=2920#comment-5780 […] previously installed and ran PB Jelly. Despite no error messages being output, I noticed something odd during my quick post-assembly […]

]]> By: Assembly Comparison – Oly Assemblies Using Quast | Sam's Notebook http://onsnetwork.org/kubu4/2017/11/14/genome-assembly-olympia-oyster-illumina-pacbio-using-pb-jelly-wbgi-scaffold-assembly/#comment-5763 Tue, 14 Nov 2017 21:53:16 +0000 http://onsnetwork.org/kubu4/?p=2920#comment-5763 […] tidbit: The pbjelly_sjw_01 assembly is EXACTLY the same as the soap_bgi_01. Looking at the output messages from that PB Jelly assembly, one can see why. The messages indicate that no gaps were filled on the BGI scaffold reference! […]

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