Intersecting DMRs

Posted by & filed under Cgigas DNA Methylation.

To try to determine where the DMRs defined by three *sig.bedGraph files described here are located on genome – intersectbed was used, some steps and … graph

Full notebook @

http://nbviewer.ipython.org/github/sr320/paper-Temp-stress/blob/authorea/ipynb/Array-feature-overlap-02.ipynb

tlrs

Array-feature-overlap-02_1AA0EA52.png

Array-feature-overlap-02_1AA0D233.png

One Response to “Intersecting DMRs”

  1. Profile photo of Steven Roberts

    Steven Roberts

    Next step will be to determine stats on this, but then move onto more intersects including

    • gene by function (GOslim)
    • new gene IDs defined by Tophat analysis
    • differentially expression genes