Lottia - Limpet

Present in all metazoa

>0 in metazoa 1 copy in LITTO

./tblastn -query /Volumes/Bay3/Software/ncbi-blast-2.2.26+/query/OrthDB_meta_Lotgi1.fa -db /Volumes/Bay3/Software/ncbi-blast-2.2.26+/db/Ostrea_lur_transcriptome -outfmt 6 -out /Volumes/web/cnidarian/OrthoDB_Lotgi1_Ostrea_tblastn.txt -max_target_seqs 1 -num_threads 4 -evalue 1E-05

28 matches 

./tblastn -query /Volumes/Bay3/Software/ncbi-blast-2.2.26+/query/OrthDB_meta_Lotgi1.fa -db /Volumes/Bay3/Software/ncbi-blast-2.2.26+/db/Haliotis_kam_transcriptome -outfmt 6 -out /Volumes/web/cnidarian/OrthoDB_Lotgi1_Haliotis_kam_tblastn.txt -max_target_seqs 1 -num_threads 1 -evalue 1E-05

odd seem like on 2 Lotgi1 matches

will redo with lower evalue 

/tblastn -query /Volumes/Bay3/Software/ncbi-blast-2.2.26+/query/OrthDB_meta_Lotgi1.fa -db /Volumes/Bay3/Software/ncbi-blast-2.2.26+/db/Haliotis_kam_transcriptome -outfmt 6 -out /Volumes/web/cnidarian/OrthoDB_Lotgi1_Haliotis_kam_tblastn_evalue10.txt -max_target_seqs 1 -num_threads 1 

need to think about this. Assume its just that far less Haliotis contigs?