% Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0  1116    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  1116  100  1116    0     0  18852      0 --:--:-- --:--:-- --:--:-- 1089k
/opt/sge6.2/execd_spool/c300-112/job_scripts/1762191: line 75: [: : integer expression expected
+ Trinity.pl --left filtered_106A_Female_Mix_GATCAG_L004_R1.fastq --right filtered_106A_Female_Mix_GATCAG_L004_R2.fastq --JM 256G --seqType fq --CPU 22 --inchworm_cpu 10 --min_kmer_cov 1 --min_contig_length 200 --max_reads_per_graph 20000000 --max_number_of_paths_per_node 10 --group_pairs_distance 500 --path_reinforcement_distance 75 --path_reinforcement_distance 75 --output /dev/shm/trinity_out --bflyHeapSpaceMax 48G --bflyHeapSpaceInit 4G --bflyCalculateCPU

real	640m10.013s
user	4625m40.481s
sys	1081m58.529s
+ set +x
tar: Removing leading `/' from member names
  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0  1179    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  1179  100  1179    0     0   8023      0 --:--:-- --:--:-- --:--:-- 1151k
  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0  1127    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  1127  100  1127    0     0  20818      0 --:--:-- --:--:-- --:--:-- 1100k