Directory Listing of /trilobite/notebooks/sam/robertslab.github.io/sams-notebook/posts/2020/

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2020-01-02-Reagent-Prep---RNA-Pico-Ladder-Aliquoting-and-Testing/2020-01-02-Reagent-Prep---RNA-Pico-Ladder-Aliquoting-and-Testing/ - Oct 01 2023 12:07:11 AM
2020-01-03-Transcriptome-Annotation---C.bairdi-Using-DIAMOND-BLASTx-on-Mox-and-MEGAN6-Meganizer/2020-01-03-Transcriptome-Annotation---C.bairdi-Using-DIAMOND-BLASTx-on-Mox-and-MEGAN6-Meganizer/ - Oct 01 2023 12:07:10 AM
2020-01-07-NanoPore-Sequencing---Initial-NanoPore-MinION-Lambda-Sequencing-Test/2020-01-07-NanoPore-Sequencing---Initial-NanoPore-MinION-Lambda-Sequencing-Test/ - Oct 01 2023 12:07:09 AM
2020-01-08-DNA-Isolation-and-Quantification---C.bairdi-gDNA-from-EtOH-Preserved-Tissue/2020-01-08-DNA-Isolation-and-Quantification---C.bairdi-gDNA-from-EtOH-Preserved-Tissue/ - Oct 01 2023 12:07:08 AM
2020-01-09-DNA-Quality-Assessment---Agarose-Gel-and-NanoDrop-on-C.bairdi-gDNA/2020-01-09-DNA-Quality-Assessment---Agarose-Gel-and-NanoDrop-on-C.bairdi-gDNA/ - Oct 01 2023 12:07:06 AM
2020-01-09-NanoPore-Sequencing---C.bairdi-gDNA-Sample-20102558-2729/2020-01-09-NanoPore-Sequencing---C.bairdi-gDNA-Sample-20102558-2729/ - Oct 01 2023 12:07:06 AM
2020-01-10-Lab-Maintenance---Cluster-UPS-Battery-Replacement/2020-01-10-Lab-Maintenance---Cluster-UPS-Battery-Replacement/ - Oct 01 2023 12:07:05 AM
2020-01-14-RNAseq-Reads-Extractions---C.bairdi-Taxonomic-Reads-Extractions-with-MEGAN6-on-swoose/2020-01-14-RNAseq-Reads-Extractions---C.bairdi-Taxonomic-Reads-Extractions-with-MEGAN6-on-swoose/ - Oct 01 2023 12:07:04 AM
2020-01-17-DNA-Isolation-and-Quantification---C.bairdi-Hemolymph-Pellets-in-RNAlater/2020-01-17-DNA-Isolation-and-Quantification---C.bairdi-Hemolymph-Pellets-in-RNAlater/ - Oct 01 2023 12:07:01 AM
2020-01-17-RNA-Isolation-and-Quantification---C.bairdi-Hemolymph-Pellets-in-RNAlater/2020-01-17-RNA-Isolation-and-Quantification---C.bairdi-Hemolymph-Pellets-in-RNAlater/ - Oct 01 2023 12:07:03 AM
2020-01-22-Data-Wrangling---Arthropoda-and-Alveolata-Taxonomic-RNAseq-FastQ-Extractions/2020-01-22-Data-Wrangling---Arthropoda-and-Alveolata-Taxonomic-RNAseq-FastQ-Extractions/ - Oct 01 2023 12:06:57 AM
2020-01-22-DNA-Isolation---C.bairdi-20102558-2729-EtOH-preserved-Tissue-via-Three-Variations-Using-Quick-DNA-RNA-MicroPrep-Kit/2020-01-22-DNA-Isolation---C.bairdi-20102558-2729-EtOH-preserved-Tissue-via-Three-Variations-Using-Quick-DNA-RNA-MicroPrep-Kit/ - Oct 01 2023 12:06:58 AM
2020-01-22-DNA-Quality-Assessment---Agarose-Gel-for-C.bairdi-20102558-2729-gDNA-from-20200122/2020-01-22-DNA-Quality-Assessment---Agarose-Gel-for-C.bairdi-20102558-2729-gDNA-from-20200122/ - Oct 01 2023 12:06:56 AM
2020-01-22-Transcriptome-Assembly---C.bairdi-with-MEGAN6-Taxonomy-specific-Reads-with-Trinity-on-Mox/2020-01-22-Transcriptome-Assembly---C.bairdi-with-MEGAN6-Taxonomy-specific-Reads-with-Trinity-on-Mox/ - Oct 01 2023 12:07:01 AM
2020-01-22-Transcriptome-Assembly---Hematodinium-with-MEGAN6-Taxonomy-specific-Reads-with-Trinity-on-Mox/2020-01-22-Transcriptome-Assembly---Hematodinium-with-MEGAN6-Taxonomy-specific-Reads-with-Trinity-on-Mox/ - Oct 01 2023 12:06:59 AM
2020-01-23-RNA-Isolation-and-Quantification---C.bairdi-Hemocyte-Pellets-in-RNAlater-Troubleshooting/2020-01-23-RNA-Isolation-and-Quantification---C.bairdi-Hemocyte-Pellets-in-RNAlater-Troubleshooting/ - Oct 01 2023 12:06:56 AM
2020-01-23-Transcriptome-Annotation---C.bairdi-MEGAN-Trinity-Assembly-Using-DIAMOND-BLASTx-on-Mox/2020-01-23-Transcriptome-Annotation---C.bairdi-MEGAN-Trinity-Assembly-Using-DIAMOND-BLASTx-on-Mox/ - Oct 01 2023 12:06:54 AM
2020-01-23-Transcriptome-Annotation---Hematodinium-MEGAN-Trinity-Assembly-Using-DIAMOND-BLASTx-on-Mox/2020-01-23-Transcriptome-Annotation---Hematodinium-MEGAN-Trinity-Assembly-Using-DIAMOND-BLASTx-on-Mox/ - Oct 01 2023 12:06:54 AM
2020-01-23-Transdecoder---C.bairdi-MEGAN6-Taxonomic-Specific-Reads-Assembly-from-20200122/2020-01-23-Transdecoder---C.bairdi-MEGAN6-Taxonomic-Specific-Reads-Assembly-from-20200122/ - Oct 01 2023 12:06:52 AM
2020-01-23-Transdecoder---Hematodinium-MEGAN6-Taxonomic-Specific-Reads-Assembly-from-20200122/2020-01-23-Transdecoder---Hematodinium-MEGAN6-Taxonomic-Specific-Reads-Assembly-from-20200122/ - Oct 01 2023 12:06:51 AM
2020-01-24-RNA-Isolation-and-Quantification---C.bairdi-Hemocyte-Pellets-in-RNAlater/2020-01-24-RNA-Isolation-and-Quantification---C.bairdi-Hemocyte-Pellets-in-RNAlater/ - Oct 01 2023 12:06:50 AM
2020-01-26-RNA-Isolation-and-Quantification---C.bairdi-Hemocyte-Pellets-in-RNAlater/2020-01-26-RNA-Isolation-and-Quantification---C.bairdi-Hemocyte-Pellets-in-RNAlater/ - Oct 01 2023 12:06:48 AM
2020-01-26-Transcriptome-Annotation---Trinotate-C.bairdi-MEGAN6-Taxonomic-specific-Trinity-Assembly-on-Mox/2020-01-26-Transcriptome-Annotation---Trinotate-C.bairdi-MEGAN6-Taxonomic-specific-Trinity-Assembly-on-Mox/ - Oct 01 2023 12:06:47 AM
2020-01-26-Transcriptome-Annotation---Trinotate-Hematodinium-MEGAN6-Taxonomic-specific-Trinity-Assembly-on-Mox/2020-01-26-Transcriptome-Annotation---Trinotate-Hematodinium-MEGAN6-Taxonomic-specific-Trinity-Assembly-on-Mox/ - Oct 01 2023 12:06:46 AM
2020-01-28-DNA-Isolation-and-Quantification---C.bairdi-Hemocyte-Pellets-in-RNAlater/2020-01-28-DNA-Isolation-and-Quantification---C.bairdi-Hemocyte-Pellets-in-RNAlater/ - Oct 01 2023 12:06:44 AM
2020-01-31-Data-Wrangling---Arthropoda-and-Alveolata-Day-and-Treatment-Taxonomic-RNAseq-FastQ-Extractions/2020-01-31-Data-Wrangling---Arthropoda-and-Alveolata-Day-and-Treatment-Taxonomic-RNAseq-FastQ-Extractions/ - Oct 01 2023 12:06:43 AM
2020-02-07-Gene-Expression---C.bairdi-MEGAN6-with-Trinity-and-EdgeR/2020-02-07-Gene-Expression---C.bairdi-MEGAN6-with-Trinity-and-EdgeR/ - Oct 01 2023 12:06:42 AM
2020-02-07-Gene-Expression---Hematodinium-MEGAN6-with-Trinity-and-EdgeR/2020-02-07-Gene-Expression---Hematodinium-MEGAN6-with-Trinity-and-EdgeR/ - Oct 01 2023 12:06:41 AM
2020-02-07-Transcriptome-Assessment---BUSCO-Metazoa-on-Hematodinium-MEGAN-Transcriptome/2020-02-07-Transcriptome-Assessment---BUSCO-Metazoa-on-Hematodinium-MEGAN-Transcriptome/ - Oct 01 2023 12:06:39 AM
2020-02-07-Transcriptome-Assessment--BUSCO-Metazoa-on-C.bairdi-MEGAN-Transcriptome/2020-02-07-Transcriptome-Assessment--BUSCO-Metazoa-on-C.bairdi-MEGAN-Transcriptome/ - Oct 01 2023 12:06:40 AM
2020-02-10-DNA-Isolation-and-Quantification---Additional-C.bairdi-gDNA-from-Sample-6129_403_26/2020-02-10-DNA-Isolation-and-Quantification---Additional-C.bairdi-gDNA-from-Sample-6129_403_26/ - Oct 01 2023 12:06:37 AM
2020-02-10-DNA-Isolation-Quantification-and-Gel---C.bairdi-gDNA-Sample-6129_403_26/2020-02-10-DNA-Isolation-Quantification-and-Gel---C.bairdi-gDNA-Sample-6129_403_26/ - Oct 01 2023 12:06:38 AM
2020-02-10-RNA-Isolation-and-Quantification---C.bairdi-RNA-from-Sample-6129_403_26/2020-02-10-RNA-Isolation-and-Quantification---C.bairdi-RNA-from-Sample-6129_403_26/ - Oct 01 2023 12:06:36 AM
2020-02-11-DNA-Isolation-and-Quantification---C.bairdi-RNA-from-Samples-6212_132_9-6212_334_12-6212_485_26/2020-02-11-DNA-Isolation-and-Quantification---C.bairdi-RNA-from-Samples-6212_132_9-6212_334_12-6212_485_26/ - Oct 01 2023 12:06:33 AM
2020-02-11-RNA-Isolation-and-Quantification---C.bairdi-RNA-from-Samples-6212_132_9-6212_334_12-6212_485_26/2020-02-11-RNA-Isolation-and-Quantification---C.bairdi-RNA-from-Samples-6212_132_9-6212_334_12-6212_485_26/ - Oct 01 2023 12:06:34 AM
2020-02-20-Primer-Design---C.bairdi-Primers-for-Checking-RNA-for-Residual-gDNA/2020-02-20-Primer-Design---C.bairdi-Primers-for-Checking-RNA-for-Residual-gDNA/ - Oct 01 2023 12:06:32 AM
2020-02-25-qPCR---C.bairdi-Primer-Tests-on-gDNA/2020-02-25-qPCR---C.bairdi-Primer-Tests-on-gDNA/ - Oct 01 2023 12:06:31 AM
2020-02-26-qPCR---C.bairdi-RNA-Check-for-Residual-gDNA/2020-02-26-qPCR---C.bairdi-RNA-Check-for-Residual-gDNA/ - Oct 01 2023 12:06:30 AM
2020-02-28-Data-Wrangling---Create-Canonical-Olurida_v081-Genes-FastA/2020-02-28-Data-Wrangling---Create-Canonical-Olurida_v081-Genes-FastA/ - Oct 01 2023 12:06:29 AM
2020-03-06-RNA-Isolation-and-Quantification---C.bairdi-RNA-from-Hemolymph-Pellets-in-RNAlater/2020-03-06-RNA-Isolation-and-Quantification---C.bairdi-RNA-from-Hemolymph-Pellets-in-RNAlater/ - Oct 01 2023 12:06:28 AM
2020-03-06-TrimmingMultiQC---Methcompare-Bisulfite-FastQs-with-fastp-on-Mox/2020-03-06-TrimmingMultiQC---Methcompare-Bisulfite-FastQs-with-fastp-on-Mox/ - Oct 01 2023 12:06:27 AM
2020-03-10-qPCR---C.bairdi-RNA-Check-for-Residual-gDNA/2020-03-10-qPCR---C.bairdi-RNA-Check-for-Residual-gDNA/ - Oct 01 2023 12:06:26 AM
2020-03-11-DNA-Isolation-and-Quantification---C.bairdi-Hemocyte-Pellets-in-RNAlater/2020-03-11-DNA-Isolation-and-Quantification---C.bairdi-Hemocyte-Pellets-in-RNAlater/ - Oct 01 2023 12:06:24 AM
2020-03-11-NanoPore-Sequencing---C.bairdi-gDNA-6129_403_26/2020-03-11-NanoPore-Sequencing---C.bairdi-gDNA-6129_403_26/ - Oct 01 2023 12:06:25 AM
2020-03-18-Data-Received---C.bairdi-RNAseq-Data-from-Genewiz/2020-03-18-Data-Received---C.bairdi-RNAseq-Data-from-Genewiz/ - Oct 01 2023 12:06:23 AM
2020-03-18-Transcriptome-Annotation---C.bairdi-Using-DIAMOND-BLASTx-on-Mox-and-MEGAN6-Meganizer-on-swoose/2020-03-18-Transcriptome-Annotation---C.bairdi-Using-DIAMOND-BLASTx-on-Mox-and-MEGAN6-Meganizer-on-swoose/ - Oct 01 2023 12:06:21 AM
2020-03-18-TrimmingQCMultiQC---C.bairdi-RNAseq-FastQ-with-fastp-on-Mox/2020-03-18-TrimmingQCMultiQC---C.bairdi-RNAseq-FastQ-with-fastp-on-Mox/ - Oct 01 2023 12:06:22 AM
2020-03-30-RNAseq-Reads-Extractions---C.bairdi-Taxonomic-Reads-Extractions-with-MEGAN6-on-swoose/2020-03-30-RNAseq-Reads-Extractions---C.bairdi-Taxonomic-Reads-Extractions-with-MEGAN6-on-swoose/ - Oct 01 2023 12:06:19 AM
2020-03-30-Transcriptome-Assembly---C.bairdi-with-MEGAN6-Taxonomy-specific-Reads-with-Trinity-on-Mox/2020-03-30-Transcriptome-Assembly---C.bairdi-with-MEGAN6-Taxonomy-specific-Reads-with-Trinity-on-Mox/ - Oct 01 2023 12:06:19 AM
2020-03-31-Transcriptome-Annotation---Hematodinium-MEGAN-Trinity-Assembly-Using-DIAMOND-BLASTx-on-Mox/2020-03-31-Transcriptome-Annotation---Hematodinium-MEGAN-Trinity-Assembly-Using-DIAMOND-BLASTx-on-Mox/ - Oct 01 2023 12:06:14 AM
2020-03-31-Transcriptome-Assembly---Hematodinium-with-MEGAN6-Taxonomy-specific-Reads-with-Trinity-on-Mox/2020-03-31-Transcriptome-Assembly---Hematodinium-with-MEGAN6-Taxonomy-specific-Reads-with-Trinity-on-Mox/ - Oct 01 2023 12:06:17 AM
2020-03-31-Transcriptome-Assessment---BUSCO-Metazoa-on-Hematodinium-MEGAN-Transcriptome/2020-03-31-Transcriptome-Assessment---BUSCO-Metazoa-on-Hematodinium-MEGAN-Transcriptome/ - Oct 01 2023 12:06:16 AM
2020-04-07-Transcriptome-Assessment---BUSCO-Metazoa-on-C.bairdi-MEGAN-Transcriptome/2020-04-07-Transcriptome-Assessment---BUSCO-Metazoa-on-C.bairdi-MEGAN-Transcriptome/ - Oct 01 2023 12:06:14 AM
2020-04-07-Transdecoder---C.bairdi-MEGAN6-Taxonomic-Specific-Reads-Assembly-from-20200330/2020-04-07-Transdecoder---C.bairdi-MEGAN6-Taxonomic-Specific-Reads-Assembly-from-20200330/ - Oct 01 2023 12:06:13 AM
2020-04-07-Transdecoder---Hematodinium-MEGAN6-Taxonomic-Specific-Reads-Assembly-from-20200330/2020-04-07-Transdecoder---Hematodinium-MEGAN6-Taxonomic-Specific-Reads-Assembly-from-20200330/ - Oct 01 2023 12:06:11 AM
2020-04-08-Transcriptome-Annotation---C.bairdi-MEGAN-Trinity-Assembly-Using-DIAMOND-BLASTx-on-Mox/2020-04-08-Transcriptome-Annotation---C.bairdi-MEGAN-Trinity-Assembly-Using-DIAMOND-BLASTx-on-Mox/ - Oct 01 2023 12:06:09 AM
2020-04-08-Transcriptome-Annotation---Trinotate-Hematodinium-MEGAN6-Taxonomic-specific-Trinity-Assembly-on-Mox/2020-04-08-Transcriptome-Annotation---Trinotate-Hematodinium-MEGAN6-Taxonomic-specific-Trinity-Assembly-on-Mox/ - Oct 01 2023 12:06:11 AM
2020-04-09-Transcriptome-Annotation---Trinotate-C.bairdi-MEGAN6-Taxonomic-specific-Trinity-Assembly-on-Mox/2020-04-09-Transcriptome-Annotation---Trinotate-C.bairdi-MEGAN6-Taxonomic-specific-Trinity-Assembly-on-Mox/ - Oct 01 2023 12:06:08 AM
2020-04-13-Data-Received---C.bairdi-RNAseq-from-NWGSC/2020-04-13-Data-Received---C.bairdi-RNAseq-from-NWGSC/ - Oct 01 2023 12:06:06 AM
2020-04-13-Data-Wrangling---Arthropoda-and-Alveolata-Day-and-Treatment-Taxonomic-RNAseq-FastQ-Extractions/2020-04-13-Data-Wrangling---Arthropoda-and-Alveolata-Day-and-Treatment-Taxonomic-RNAseq-FastQ-Extractions/ - Oct 01 2023 12:06:05 AM
2020-04-14-FastQC-MultiQC---C.bairdi-Raw-RNAseq-from-NWGSC/2020-04-14-FastQC-MultiQC---C.bairdi-Raw-RNAseq-from-NWGSC/ - Oct 01 2023 12:06:04 AM
2020-04-14-Taxonomic-Assignments---C.bairdi-RNAseq-Using-DIAMOND-BLASTx-on-Mox-and-MEGAN6-Meganizer-on-swoose/2020-04-14-Taxonomic-Assignments---C.bairdi-RNAseq-Using-DIAMOND-BLASTx-on-Mox-and-MEGAN6-Meganizer-on-swoose/ - Oct 01 2023 12:06:03 AM
2020-04-14-TrimmingFastQCMultiQC---C.bairdi-RNAseq-FastQ-with-fastp-on-Mox/2020-04-14-TrimmingFastQCMultiQC---C.bairdi-RNAseq-FastQ-with-fastp-on-Mox/ - Oct 01 2023 12:06:02 AM
2020-04-15-SRA-Submission---C.bairdi-RNAseq-Data/2020-04-15-SRA-Submission---C.bairdi-RNAseq-Data/ - Oct 01 2023 12:06:01 AM
2020-04-15-Transcript-Abundance---C.bairdi-Alignment-free-with-Salmon-on-Mox-for-Grace/2020-04-15-Transcript-Abundance---C.bairdi-Alignment-free-with-Salmon-on-Mox-for-Grace/ - Oct 01 2023 12:06:00 AM
2020-04-19-RNAseq-Reads-Extractions---C.bairdi-Taxonomic-Reads-Extractions-with-MEGAN6-on-swoose/2020-04-19-RNAseq-Reads-Extractions---C.bairdi-Taxonomic-Reads-Extractions-with-MEGAN6-on-swoose/ - Oct 01 2023 12:05:59 AM
2020-04-22-Gene-Expression---C.bairdi-Pairwise-DEG-Comparisons-with-2019-RNAseq-using-Trinity-Salmon-EdgeR-on-Mox/2020-04-22-Gene-Expression---C.bairdi-Pairwise-DEG-Comparisons-with-2019-RNAseq-using-Trinity-Salmon-EdgeR-on-Mox/ - Oct 01 2023 12:05:58 AM
2020-04-26-FastQC-MultiQC---Laura-Spencers-QuantSeq-Data/2020-04-26-FastQC-MultiQC---Laura-Spencers-QuantSeq-Data/ - Oct 01 2023 12:05:57 AM
2020-04-27-GO-to-GOslim---C.bairdi-Enriched-GO-Terms-from-20200422-DEGs/2020-04-27-GO-to-GOslim---C.bairdi-Enriched-GO-Terms-from-20200422-DEGs/ - Oct 01 2023 12:05:56 AM
2020-04-29-Transcript-Abundance---C.bairdi-Alignment-free-with-Salmon-Using-2020-GW-Data-on-Mox/2020-04-29-Transcript-Abundance---C.bairdi-Alignment-free-with-Salmon-Using-2020-GW-Data-on-Mox/ - Oct 01 2023 12:05:55 AM
2020-05-02-Transcriptome-Assembly---C.bairdi-All-RNAseq-Data-Without-Taxonomic-Filters-with-Trinity-on-Mox/2020-05-02-Transcriptome-Assembly---C.bairdi-All-RNAseq-Data-Without-Taxonomic-Filters-with-Trinity-on-Mox/ - Oct 01 2023 12:05:53 AM
2020-05-08-Transcriptome-Annotation---C.bairdi-Transcriptome-v2.0-Using-DIAMOND-BLASTx-on-Mox/2020-05-08-Transcriptome-Annotation---C.bairdi-Transcriptome-v2.0-Using-DIAMOND-BLASTx-on-Mox/ - Oct 01 2023 12:05:51 AM
2020-05-08-Transcriptome-Assessment---BUSCO-Metazoa-on-C.bairdi-v2.0-Transcriptome/2020-05-08-Transcriptome-Assessment---BUSCO-Metazoa-on-C.bairdi-v2.0-Transcriptome/ - Oct 01 2023 12:05:52 AM
2020-05-08-TransDecoder---C.bairdi-Transcriptome-v2.0-from-20200502-on-Mox/2020-05-08-TransDecoder---C.bairdi-Transcriptome-v2.0-from-20200502-on-Mox/ - Oct 01 2023 12:05:50 AM
2020-05-13-Transcriptome-Annotation---Trinotate-C.bairdi-Transcriptome-v2.0-from-20200502-on-Mox/2020-05-13-Transcriptome-Annotation---Trinotate-C.bairdi-Transcriptome-v2.0-from-20200502-on-Mox/ - Oct 01 2023 12:05:48 AM
2020-05-18-Data-Wrangling---Arthropoda-and-Alveolata-D26-Pool-RNAseq-FastQ-Extractions/2020-05-18-Data-Wrangling---Arthropoda-and-Alveolata-D26-Pool-RNAseq-FastQ-Extractions/ - Oct 01 2023 12:05:46 AM
2020-05-18-Transcriptome-Assembly---C.bairdi-All-Arthropoda-specific-RNAseq-Data-with-Trinity-on-Mox/2020-05-18-Transcriptome-Assembly---C.bairdi-All-Arthropoda-specific-RNAseq-Data-with-Trinity-on-Mox/ - Oct 01 2023 12:05:45 AM
2020-05-18-Transcriptome-Assembly---C.bairdi-All-Pooled-RNAseq-Data-Without-Taxonomic-Filters-with-Trinity-on-Mox/2020-05-18-Transcriptome-Assembly---C.bairdi-All-Pooled-RNAseq-Data-Without-Taxonomic-Filters-with-Trinity-on-Mox/ - Oct 01 2023 12:05:47 AM
2020-05-19-Transcriptome-Annotation---C.bairdi-Transcriptome-v1.6-Using-DIAMOND-BLASTx-on-Mox/2020-05-19-Transcriptome-Annotation---C.bairdi-Transcriptome-v1.6-Using-DIAMOND-BLASTx-on-Mox/ - Oct 01 2023 12:05:40 AM
2020-05-19-Transcriptome-Annotation---C.bairdi-Transcriptome-v3.0-Using-DIAMOND-BLASTx-on-Mox/2020-05-19-Transcriptome-Annotation---C.bairdi-Transcriptome-v3.0-Using-DIAMOND-BLASTx-on-Mox/ - Oct 01 2023 12:05:42 AM
2020-05-19-Transcriptome-Assessment---BUSCO-Metazoa-on-C.bairdi-Transcriptome-v1.6/2020-05-19-Transcriptome-Assessment---BUSCO-Metazoa-on-C.bairdi-Transcriptome-v1.6/ - Oct 01 2023 12:05:41 AM
2020-05-19-Transcriptome-Assessment---BUSCO-Metazoa-on-C.bairdi-Transcriptome-v3.0/2020-05-19-Transcriptome-Assessment---BUSCO-Metazoa-on-C.bairdi-Transcriptome-v3.0/ - Oct 01 2023 12:05:43 AM
2020-05-19-TransDecoder---C.bairdi-Transcriptome-v1.6-on-Mox/2020-05-19-TransDecoder---C.bairdi-Transcriptome-v1.6-on-Mox/ - Oct 01 2023 12:05:37 AM
2020-05-19-TransDecoder---C.bairdi-Transcriptome-v3.0-from-20200518-on-Mox/2020-05-19-TransDecoder---C.bairdi-Transcriptome-v3.0-from-20200518-on-Mox/ - Oct 01 2023 12:05:39 AM
2020-05-20-Transcriptome-Annotation---Trinotate-C.bairdi-Transcriptome-v1.6-on-Mox/2020-05-20-Transcriptome-Annotation---Trinotate-C.bairdi-Transcriptome-v1.6-on-Mox/ - Oct 01 2023 12:05:36 AM
2020-05-21-SRA-Library-Assessment---Determine-RNAseq-Library-Strandedness-from-P.trituberculatus-SRA-BioProject-PRJNA597187/2020-05-21-SRA-Library-Assessment---Determine-RNAseq-Library-Strandedness-from-P.trituberculatus-SRA-BioProject-PRJNA597187/ - Oct 01 2023 12:05:35 AM
2020-05-21-Tutorial---SRA-Toolkit-for-Data-Retrieval-and-Conversion-to-FastQ/2020-05-21-Tutorial---SRA-Toolkit-for-Data-Retrieval-and-Conversion-to-FastQ/ - Oct 01 2023 12:05:36 AM
2020-05-23-Transcriptome-Assembly---P.trituberculatus-Japanese-blue-crab-NCBI-SRA-BioProject-PRJNA597187-Data-with-Trinity-on-Mox/2020-05-23-Transcriptome-Assembly---P.trituberculatus-Japanese-blue-crab-NCBI-SRA-BioProject-PRJNA597187-Data-with-Trinity-on-Mox/ - Oct 01 2023 12:05:33 AM
2020-05-26-Transcriptome-Annotation---Trinotate-C.bairdi-Transcriptome-v3.0-on-Mox/2020-05-26-Transcriptome-Annotation---Trinotate-C.bairdi-Transcriptome-v3.0-on-Mox/ - Oct 01 2023 12:05:32 AM
2020-05-27-Transcriptome-Annotation---C.bairdi-Transcriptome-v1.7-Using-DIAMOND-BLASTx-on-Mox/2020-05-27-Transcriptome-Annotation---C.bairdi-Transcriptome-v1.7-Using-DIAMOND-BLASTx-on-Mox/ - Oct 01 2023 12:05:28 AM
2020-05-27-Transcriptome-Assembly---C.bairdi-All-Pooled-Arthropoda-only-RNAseq-Data-with-Trinity-on-Mox/2020-05-27-Transcriptome-Assembly---C.bairdi-All-Pooled-Arthropoda-only-RNAseq-Data-with-Trinity-on-Mox/ - Oct 01 2023 12:05:31 AM
2020-05-27-Transcriptome-Assessment---BUSCO-Metazoa-on-C.bairdi-Transcriptome-v1.7/2020-05-27-Transcriptome-Assessment---BUSCO-Metazoa-on-C.bairdi-Transcriptome-v1.7/ - Oct 01 2023 12:05:29 AM
2020-05-27-TransDecoder---C.bairdi-Transcriptome-v1.7-on-Mox/2020-05-27-TransDecoder---C.bairdi-Transcriptome-v1.7-on-Mox/ - Oct 01 2023 12:05:27 AM
2020-05-28-Transcriptome-Comparisons---C.bairdi-BUSCO-Scores/2020-05-28-Transcriptome-Comparisons---C.bairdi-BUSCO-Scores/ - Oct 01 2023 12:05:26 AM
2020-05-29-Transcriptome-Annotation---Trinotate-C.bairdi-Transcriptome-v1.7-on-Mox/2020-05-29-Transcriptome-Annotation---Trinotate-C.bairdi-Transcriptome-v1.7-on-Mox/ - Oct 01 2023 12:05:24 AM
2020-05-29-Transcriptome-Comparison---C.bairdi-Transcriptomes-Compared-with-DETONATE-on-Mox/2020-05-29-Transcriptome-Comparison---C.bairdi-Transcriptomes-Compared-with-DETONATE-on-Mox/ - Oct 01 2023 12:05:23 AM
2020-06-01-Transcriptome-Comparison---C.bairdi-Transcriptomes-Evaluations-with-DETONATE-on-Mox/2020-06-01-Transcriptome-Comparison---C.bairdi-Transcriptomes-Evaluations-with-DETONATE-on-Mox/ - Oct 01 2023 12:05:22 AM
2020-06-04-Transcriptome-Annotation---C.bairdi-Transcriptomes-v2.0-and-v3.0-with-DIAMOND-BLASTx-on-Mox/2020-06-04-Transcriptome-Annotation---C.bairdi-Transcriptomes-v2.0-and-v3.0-with-DIAMOND-BLASTx-on-Mox/ - Oct 01 2023 12:05:21 AM
2020-06-05-Sequence-Extractions---C.bairdi-Transcriptomes-v2.0-and-v3.0-Excluding-Alveolata-with-MEGAN6-on-Swoose/2020-06-05-Sequence-Extractions---C.bairdi-Transcriptomes-v2.0-and-v3.0-Excluding-Alveolata-with-MEGAN6-on-Swoose/ - Oct 01 2023 12:05:19 AM
2020-06-05-Transcriptome-Assessment---BUSCO-Metazoa-on-C.bairdi-Transcriptome-v2.1/2020-06-05-Transcriptome-Assessment---BUSCO-Metazoa-on-C.bairdi-Transcriptome-v2.1/ - Oct 01 2023 12:05:18 AM
2020-06-05-Transcriptome-Assessment---BUSCO-Metazoa-on-C.bairdi-Transcriptome-v3.1/2020-06-05-Transcriptome-Assessment---BUSCO-Metazoa-on-C.bairdi-Transcriptome-v3.1/ - Oct 01 2023 12:05:17 AM
2020-06-08-Transcriptome-Annotation---C.bairdi-Transcriptomes-v2.1-and-v3.1-Using-DIAMOND-BLASTx-on-Mox/2020-06-08-Transcriptome-Annotation---C.bairdi-Transcriptomes-v2.1-and-v3.1-Using-DIAMOND-BLASTx-on-Mox/ - Oct 01 2023 12:05:15 AM
2020-06-18-Metagenomics---Data-Extractions-Using-MEGAN6/2020-06-18-Metagenomics---Data-Extractions-Using-MEGAN6/ - Oct 01 2023 12:05:14 AM
2020-07-08-ENA-Submission---Ostrea-lurida-draft-genome-Olurida_v081.fa/2020-07-08-ENA-Submission---Ostrea-lurida-draft-genome-Olurida_v081.fa/ - Oct 01 2023 12:05:13 AM
2020-07-09-SRA-Submission---Geoduck-Epigenetic-Ocean-Acidification-RNAseq/2020-07-09-SRA-Submission---Geoduck-Epigenetic-Ocean-Acidification-RNAseq/ - Oct 01 2023 12:05:11 AM
2020-07-22-DNA-Isolation-and-Quantification---C.gigas-Diploid-Ronit-and-Triploid-Nisbet/2020-07-22-DNA-Isolation-and-Quantification---C.gigas-Diploid-Ronit-and-Triploid-Nisbet/ - Oct 01 2023 12:05:11 AM
2020-07-23-qPCR---Testing-P.generosa-Reproduction-related-Primers/2020-07-23-qPCR---Testing-P.generosa-Reproduction-related-Primers/ - Oct 01 2023 12:05:10 AM
2020-07-27-SRA-Submission---P.generosa-Metagenomics-Data/2020-07-27-SRA-Submission---P.generosa-Metagenomics-Data/ - Oct 01 2023 12:05:08 AM
2020-07-29-qPCR---Testing-P.generosa-Reproduction-related-Primers/2020-07-29-qPCR---Testing-P.generosa-Reproduction-related-Primers/ - Oct 01 2023 12:05:07 AM
2020-07-30-Primer-Design-and-In-Silico-Testing---Geoduck-Reproduction-Primers/2020-07-30-Primer-Design-and-In-Silico-Testing---Geoduck-Reproduction-Primers/ - Oct 01 2023 12:05:06 AM
2020-07-31-FastQ-Read-Alignment-and-Quantification---P.generosa-Water-Metagenomic-Libraries-to-MetaGeneMark-Assembly-with-Hisat2-on-Mox/2020-07-31-FastQ-Read-Alignment-and-Quantification---P.generosa-Water-Metagenomic-Libraries-to-MetaGeneMark-Assembly-with-Hisat2-on-Mox/ - Oct 01 2023 12:05:04 AM
2020-08-06-qPCR---P.generosa-APLP-and-TIF3s8-1-with-cDNA/2020-08-06-qPCR---P.generosa-APLP-and-TIF3s8-1-with-cDNA/ - Oct 01 2023 12:05:03 AM
2020-08-14-Transcriptome-Annotation---Hematodinium-Transcriptomes-v1.6-v1.7-v2.1-v3.1-with-DIAMOND-BLASTx-on-Mox/2020-08-14-Transcriptome-Annotation---Hematodinium-Transcriptomes-v1.6-v1.7-v2.1-v3.1-with-DIAMOND-BLASTx-on-Mox/ - Oct 01 2023 12:05:02 AM
2020-08-14-Transcriptome-Assessment---BUSCO-Metazoa-on-Hematodinium-v1.6-v1.7-v2.1-and-v3.1-on-Mox/2020-08-14-Transcriptome-Assessment---BUSCO-Metazoa-on-Hematodinium-v1.6-v1.7-v2.1-and-v3.1-on-Mox/ - Oct 01 2023 12:05:01 AM
2020-08-17-Assembly-Stats---Hematodinium-Transcriptomes-v2.1-and-v3.1-Trinity-Stats-on-Mox/2020-08-17-Assembly-Stats---Hematodinium-Transcriptomes-v2.1-and-v3.1-Trinity-Stats-on-Mox/ - Oct 01 2023 12:05:00 AM
2020-08-17-TransDecoder---Hematodinium-Transcriptomes--v1.6-v1.7-v2.1-and-v3.1-on-Mox/2020-08-17-TransDecoder---Hematodinium-Transcriptomes--v1.6-v1.7-v2.1-and-v3.1-on-Mox/ - Oct 01 2023 12:04:59 AM
2020-08-18-Trimming-FastQC-MultiQC---Robertos-C.gigas-WGBS-FastQ-Data-with-fastp-FastQC-and-MultiQC-on-Mox/2020-08-18-Trimming-FastQC-MultiQC---Robertos-C.gigas-WGBS-FastQ-Data-with-fastp-FastQC-and-MultiQC-on-Mox/ - Oct 01 2023 12:04:58 AM
2020-08-19-Assembly-Stats---C.bairdi-Transcriptomes-v2.1-and-v3.1-Trinity-Stats-on-Mox/2020-08-19-Assembly-Stats---C.bairdi-Transcriptomes-v2.1-and-v3.1-Trinity-Stats-on-Mox/ - Oct 01 2023 12:04:56 AM
2020-08-20-Samples-Received---C.gigas-High-Low-pH-Triploid-Diploid-from-Maria-Haws-Lab/2020-08-20-Samples-Received---C.gigas-High-Low-pH-Triploid-Diploid-from-Maria-Haws-Lab/ - Oct 01 2023 12:04:54 AM
2020-08-20-Samples-Submitted---Ronits-C.gigas-Diploid-and-Triploid-Ctenidia-to-ZymoResearch-for-WGBS/2020-08-20-Samples-Submitted---Ronits-C.gigas-Diploid-and-Triploid-Ctenidia-to-ZymoResearch-for-WGBS/ - Oct 01 2023 12:04:55 AM
2020-08-21-DNA-Isolation-and-Quantification---C.gigas-High-Low-pH-Triploid-and-Diploid-Ctenidia/2020-08-21-DNA-Isolation-and-Quantification---C.gigas-High-Low-pH-Triploid-and-Diploid-Ctenidia/ - Oct 01 2023 12:04:53 AM
2020-08-24-qPCR---P.generosa-RPL5-v2-v3-and-TIF3s6b-v2-v3-Primer-Tests/2020-08-24-qPCR---P.generosa-RPL5-v2-v3-and-TIF3s6b-v2-v3-Primer-Tests/ - Oct 01 2023 12:04:52 AM
2020-08-24-Sample-Submitted---C.gigas-Diploid-Triploid-pH-Treatments-Ctenidia-to-ZymoResearch-for-WGBS/2020-08-24-Sample-Submitted---C.gigas-Diploid-Triploid-pH-Treatments-Ctenidia-to-ZymoResearch-for-WGBS/ - Oct 01 2023 12:04:50 AM
2020-08-25-qPCR---P.generosa-RPL5-and-TIF3s6b-v2-and-v3-Normalizing-Gene-Assessment/2020-08-25-qPCR---P.generosa-RPL5-and-TIF3s6b-v2-and-v3-Normalizing-Gene-Assessment/ - Oct 01 2023 12:04:49 AM
2020-08-26-Transcriptome-Annotation---Trinotate-Hematodinium-v2.1-on-Mox/2020-08-26-Transcriptome-Annotation---Trinotate-Hematodinium-v2.1-on-Mox/ - Oct 01 2023 12:04:46 AM
2020-08-26-Transcriptome-Annotation---Trinotate-Hematodinium-v3.1-on-Mox/2020-08-26-Transcriptome-Annotation---Trinotate-Hematodinium-v3.1-on-Mox/ - Oct 01 2023 12:04:45 AM
2020-08-26-TransDecoder---C.bairdi-Transcriptomes-v2.1-and-v3.1-on-Mox/2020-08-26-TransDecoder---C.bairdi-Transcriptomes-v2.1-and-v3.1-on-Mox/ - Oct 01 2023 12:04:47 AM
2020-08-28-Transcriptome-Annotation---Trinotate-C.bairdi-v3.1-on-Mox/2020-08-28-Transcriptome-Annotation---Trinotate-C.bairdi-v3.1-on-Mox/ - Oct 01 2023 12:04:44 AM
2020-08-31-Transcriptome-Annotation---Trinotate-C.bairdi-v2.1-on-Mox/2020-08-31-Transcriptome-Annotation---Trinotate-C.bairdi-v2.1-on-Mox/ - Oct 01 2023 12:04:44 AM
2020-09-01-DNA-Quantification---Re-quant-Ronits-C.gigas-Diploid-Triploid-Ctenidia-gDNA-Submitted-to-ZymoResearch/2020-09-01-DNA-Quantification---Re-quant-Ronits-C.gigas-Diploid-Triploid-Ctenidia-gDNA-Submitted-to-ZymoResearch/ - Oct 01 2023 12:04:42 AM
2020-09-01-Samples-Submission---Supplemental-Ronits-C.gigas-Diploid-Triploid-Ctendidia-gDNA-for-WGBS-by-ZymoResearch/2020-09-01-Samples-Submission---Supplemental-Ronits-C.gigas-Diploid-Triploid-Ctendidia-gDNA-for-WGBS-by-ZymoResearch/ - Oct 01 2023 12:04:41 AM
2020-09-04-Data-Wrangling---NanoPore-Fast5-Conversion-to-FastQ-of-C.bairdi-6129_403_26-on-Mox-with-GPU-Node/2020-09-04-Data-Wrangling---NanoPore-Fast5-Conversion-to-FastQ-of-C.bairdi-6129_403_26-on-Mox-with-GPU-Node/ - Oct 01 2023 12:04:37 AM
2020-09-04-Data-Wrangling---NanoPore-Fast5-Conversion-to-FastQ-of-C.bairdi-20102558-2729-Run-01-on-Mox-with-GPU-Node/2020-09-04-Data-Wrangling---NanoPore-Fast5-Conversion-to-FastQ-of-C.bairdi-20102558-2729-Run-01-on-Mox-with-GPU-Node/ - Oct 01 2023 12:04:40 AM
2020-09-04-Data-Wrangling---NanoPore-Fast5-Conversion-to-FastQ-of-C.bairdi-20102558-2729-Run-02-on-Mox-with-GPU-Node/2020-09-04-Data-Wrangling---NanoPore-Fast5-Conversion-to-FastQ-of-C.bairdi-20102558-2729-Run-02-on-Mox-with-GPU-Node/ - Oct 01 2023 12:04:39 AM
2020-09-14-Data-Wrangling---Visualization-of-C.bairdi-NanoPore-Sequencing-Using-NanoPlot-on-Mox/2020-09-14-Data-Wrangling---Visualization-of-C.bairdi-NanoPore-Sequencing-Using-NanoPlot-on-Mox/ - Oct 01 2023 12:04:36 AM
2020-09-14-qPCR---Geoduck-Normalizing-Gene-Primer-Checks/2020-09-14-qPCR---Geoduck-Normalizing-Gene-Primer-Checks/ - Oct 01 2023 12:04:35 AM
2020-09-16-qPCR---Geoduck-Normalizing-Gene-Primers-28s-v4-and-EF1a-v1-Tests/2020-09-16-qPCR---Geoduck-Normalizing-Gene-Primers-28s-v4-and-EF1a-v1-Tests/ - Oct 01 2023 12:04:34 AM
2020-09-17-Data-Wrangling---C.bairdi-NanoPore-Quality-Filtering-Using-NanoFilt-on-Mox/2020-09-17-Data-Wrangling---C.bairdi-NanoPore-Quality-Filtering-Using-NanoFilt-on-Mox/ - Oct 01 2023 12:04:31 AM
2020-09-17-Genome-Assembly---C.bairdi---cbai_v1.0---Using-All-NanoPore-Data-With-Flye-on-Mox/2020-09-17-Genome-Assembly---C.bairdi---cbai_v1.0---Using-All-NanoPore-Data-With-Flye-on-Mox/ - Oct 01 2023 12:04:32 AM
2020-09-17-Taxonomic-Assignments---C.bairdi-NanoPore-Reads-Using-DIAMOND-BLASTx-on-Mox-and-MEGAN6-daa2rma-on-swoose/2020-09-17-Taxonomic-Assignments---C.bairdi-NanoPore-Reads-Using-DIAMOND-BLASTx-on-Mox-and-MEGAN6-daa2rma-on-swoose/ - Oct 01 2023 12:04:33 AM
2020-09-18-Assembly-Assessment---BUSCO-C.bairdi-Genome-v1.0-on-Mox/2020-09-18-Assembly-Assessment---BUSCO-C.bairdi-Genome-v1.0-on-Mox/ - Oct 01 2023 12:04:29 AM
2020-09-21-SRA-Submissions---NanoPore-C.bairdi-20102558-2729-and-6129_403_26/2020-09-21-SRA-Submissions---NanoPore-C.bairdi-20102558-2729-and-6129_403_26/ - Oct 01 2023 12:04:28 AM
2020-09-23-Data-Wrangling---Subsetting-cbai_genome_v1.0-Assembly-with-faidx/2020-09-23-Data-Wrangling---Subsetting-cbai_genome_v1.0-Assembly-with-faidx/ - Oct 01 2023 12:04:27 AM
2020-09-24-Assembly-Assessment---BUSCO-C.bairdi-Genome-v1.01-on-Mox/2020-09-24-Assembly-Assessment---BUSCO-C.bairdi-Genome-v1.01-on-Mox/ - Oct 01 2023 12:04:26 AM
2020-09-28-Data-Wrangling---C.bairdi-NanoPore-6129-403-26-Quality-Filtering-Using-NanoFilt-on-Mox/2020-09-28-Data-Wrangling---C.bairdi-NanoPore-6129-403-26-Quality-Filtering-Using-NanoFilt-on-Mox/ - Oct 01 2023 12:04:23 AM
2020-09-28-Data-Wrangling---C.bairdi-NanoPore-20102558-2729-Quality-Filtering-Using-NanoFilt-on-Mox/2020-09-28-Data-Wrangling---C.bairdi-NanoPore-20102558-2729-Quality-Filtering-Using-NanoFilt-on-Mox/ - Oct 01 2023 12:04:24 AM
2020-09-28-Taxonomic-Assignments---C.bairdi-6129-403-26-Q7-NanoPore-Reads-Using-DIAMOND-BLASTx-on-Mox-and-MEGAN6-daa2rma-on-emu/2020-09-28-Taxonomic-Assignments---C.bairdi-6129-403-26-Q7-NanoPore-Reads-Using-DIAMOND-BLASTx-on-Mox-and-MEGAN6-daa2rma-on-emu/ - Oct 01 2023 12:04:20 AM
2020-09-28-Taxonomic-Assignments---C.bairdi-20102558-2729-Q7-NanoPore-Reads-Using-DIAMOND-BLASTx-on-Mox-and-MEGAN6-daa2rma-on-emu/2020-09-28-Taxonomic-Assignments---C.bairdi-20102558-2729-Q7-NanoPore-Reads-Using-DIAMOND-BLASTx-on-Mox-and-MEGAN6-daa2rma-on-emu/ - Oct 01 2023 12:04:22 AM
2020-10-02-Comparison---C.bairdi-20102558-2729-vs.-6129-403-26-NanoPore-Taxonomic-Assignments-Using-MEGAN6/2020-10-02-Comparison---C.bairdi-20102558-2729-vs.-6129-403-26-NanoPore-Taxonomic-Assignments-Using-MEGAN6/ - Oct 01 2023 12:04:19 AM
2020-10-07-NanoPore-Reads-Extractions---C.bairdi-Taxonomic-Reads-Extractions-with-MEGAN6-on-201002558-2729-Q7-and-6129-403-26-Q7/2020-10-07-NanoPore-Reads-Extractions---C.bairdi-Taxonomic-Reads-Extractions-with-MEGAN6-on-201002558-2729-Q7-and-6129-403-26-Q7/ - Oct 01 2023 12:04:19 AM
2020-10-13-Data-Wrangling---C.bairdi-NanoPore-Reads-Extractions-With-Seqtk-on-Mephisto/2020-10-13-Data-Wrangling---C.bairdi-NanoPore-Reads-Extractions-With-Seqtk-on-Mephisto/ - Oct 01 2023 12:04:18 AM
2020-10-14-Read-Mapping---C.bairdi-201002558-2729-Q7-and-6129-403-26-Q7-Taxa-Specific-NanoPore-Reads-to-cbai_genome_v1.01.fasta-Using-Minimap2-on-Mox/2020-10-14-Read-Mapping---C.bairdi-201002558-2729-Q7-and-6129-403-26-Q7-Taxa-Specific-NanoPore-Reads-to-cbai_genome_v1.01.fasta-Using-Minimap2-on-Mox/ - Oct 01 2023 12:04:16 AM
2020-10-21-DNA-Shearing---M.magister-gDNA-Shear-Testing-and-Bioanalyzer/2020-10-21-DNA-Shearing---M.magister-gDNA-Shear-Testing-and-Bioanalyzer/ - Oct 01 2023 12:04:15 AM
2020-10-22-DNA-Shearing---M.magister-CH05-21-gDNA-Full-Shearing-Test-and-Bioanalyzer/2020-10-22-DNA-Shearing---M.magister-CH05-21-gDNA-Full-Shearing-Test-and-Bioanalyzer/ - Oct 01 2023 12:04:14 AM
2020-10-26-DNA-Shearing---M.magister-gDNA-Shearing-All-Samples-and-Bioanalyzer/2020-10-26-DNA-Shearing---M.magister-gDNA-Shearing-All-Samples-and-Bioanalyzer/ - Oct 01 2023 12:04:13 AM
2020-10-27-DNA-Shearing---M.magister-gDNA-Additional-Shearing-CH05-01_21-CH07-11-and-Bioanalyzer/2020-10-27-DNA-Shearing---M.magister-gDNA-Additional-Shearing-CH05-01_21-CH07-11-and-Bioanalyzer/ - Oct 01 2023 12:04:12 AM
2020-10-28-MBD-Selection---M.magister-Sheared-Gill-gDNA-8-of-24-Samples-Set-1-of-3/2020-10-28-MBD-Selection---M.magister-Sheared-Gill-gDNA-8-of-24-Samples-Set-1-of-3/ - Oct 01 2023 12:04:10 AM
2020-10-29-Trimming---Shelly-S.salar-RNAseq-Using-fastp-and-MultiQC-on-Mox/2020-10-29-Trimming---Shelly-S.salar-RNAseq-Using-fastp-and-MultiQC-on-Mox/ - Oct 01 2023 12:04:09 AM
2020-11-02-MBD-Selection---M.magister-Sheared-Gill-gDNA-8-of-24-Samples-Set-2-of-3/2020-11-02-MBD-Selection---M.magister-Sheared-Gill-gDNA-8-of-24-Samples-Set-2-of-3/ - Oct 01 2023 12:04:08 AM
2020-11-03-MBD-Selection---M.magister-Sheared-Gill-gDNA-16-of-24-Samples-Set-3-of-3/2020-11-03-MBD-Selection---M.magister-Sheared-Gill-gDNA-16-of-24-Samples-Set-3-of-3/ - Oct 01 2023 12:04:07 AM
2020-11-03-RNAseq-Alignments---Trimmed-S.salar-RNAseq-to-GCF_000233375.1_ICSASG_v2_genomic.fa-Using-Hisat2-on-Mox/2020-11-03-RNAseq-Alignments---Trimmed-S.salar-RNAseq-to-GCF_000233375.1_ICSASG_v2_genomic.fa-Using-Hisat2-on-Mox/ - Oct 01 2023 12:04:06 AM
2020-11-04-RNAseq-Alignments---S.salar-HISAT2-BAMs-to-GCF_000233375.1_ICSASG_v2_genomic.gtf-Transcriptome-Using-StringTie-on-Mox/2020-11-04-RNAseq-Alignments---S.salar-HISAT2-BAMs-to-GCF_000233375.1_ICSASG_v2_genomic.gtf-Transcriptome-Using-StringTie-on-Mox/ - Oct 01 2023 12:04:05 AM
2020-11-05-Hard-Drive-Upgrade---Gannet-Synology-Server/2020-11-05-Hard-Drive-Upgrade---Gannet-Synology-Server/ - Oct 01 2023 12:04:04 AM
2020-11-06-Data-Wrangling---MultiQC-on-S.salar-RNAseq-from-fastp-and-HISAT2-on-Mox/2020-11-06-Data-Wrangling---MultiQC-on-S.salar-RNAseq-from-fastp-and-HISAT2-on-Mox/ - Oct 01 2023 12:04:02 AM
2020-11-10-Data-Received---C.gigas-Ploidy-WGBS-from-Ronits-Project-via-ZymoResearch/2020-11-10-Data-Received---C.gigas-Ploidy-WGBS-from-Ronits-Project-via-ZymoResearch/ - Oct 01 2023 12:04:01 AM
2020-11-10-FastQC-MultiQC---C.gigas-Ploidy-WGBS-Raw-Sequence-Data-from-Ronits-Project-on-Mox/2020-11-10-FastQC-MultiQC---C.gigas-Ploidy-WGBS-Raw-Sequence-Data-from-Ronits-Project-on-Mox/ - Oct 01 2023 12:03:59 AM
2020-11-10-Transcriptome-Assessment---Crustacean-Transcripome-Completeness-Evaluation-Using-BUSCO-on-Mox/2020-11-10-Transcriptome-Assessment---Crustacean-Transcripome-Completeness-Evaluation-Using-BUSCO-on-Mox/ - Oct 01 2023 12:04:00 AM
2020-11-13-SRA-Submission---Ronits-C.gigas-Ploidy-WGBS/2020-11-13-SRA-Submission---Ronits-C.gigas-Ploidy-WGBS/ - Oct 01 2023 12:03:58 AM
2020-11-19-RNA-Isolation-and-Quantification---P.generosa-Hemocytes-from-Shelly/2020-11-19-RNA-Isolation-and-Quantification---P.generosa-Hemocytes-from-Shelly/ - Oct 01 2023 12:03:57 AM
2020-11-24-MBD-BSseq-Library-Prep---M.magister-MBD-selected-DNA-Using-Pico-Methyl-Seq-Kit/2020-11-24-MBD-BSseq-Library-Prep---M.magister-MBD-selected-DNA-Using-Pico-Methyl-Seq-Kit/ - Oct 01 2023 12:03:55 AM
2020-11-25-Bioanalyzer---M.magister-MBD-BSseq-Libraries/2020-11-25-Bioanalyzer---M.magister-MBD-BSseq-Libraries/ - Oct 01 2023 12:03:54 AM
2020-11-30-Trimming---Ronits-C.gigas-Ploidy-WGBS-Using-fastp-and-MultiQC-on-Mox/2020-11-30-Trimming---Ronits-C.gigas-Ploidy-WGBS-Using-fastp-and-MultiQC-on-Mox/ - Oct 01 2023 12:03:53 AM
2020-12-01-Samples-Submitted---Cockle-Clam-Gonad-Histology-Cassettes-for-H-and-E/2020-12-01-Samples-Submitted---Cockle-Clam-Gonad-Histology-Cassettes-for-H-and-E/ - Oct 01 2023 12:03:52 AM
2020-12-02-Library-Quantification---M.magister-MBD-BSseq-Libraries-with-Qubit/2020-12-02-Library-Quantification---M.magister-MBD-BSseq-Libraries-with-Qubit/ - Oct 01 2023 12:03:50 AM
2020-12-02-Sample-Submission---M.magister-MBD-BSseq-Libraries-for-MiSeq-at-NOAA/2020-12-02-Sample-Submission---M.magister-MBD-BSseq-Libraries-for-MiSeq-at-NOAA/ - Oct 01 2023 12:03:49 AM
2020-12-02-Trimming---Ronits-C.gigas-Ploidy-WGBS-10bp-5-and-3-Prime-Ends-Using-fastp-and-MultiQC-on-Mox/2020-12-02-Trimming---Ronits-C.gigas-Ploidy-WGBS-10bp-5-and-3-Prime-Ends-Using-fastp-and-MultiQC-on-Mox/ - Oct 01 2023 12:03:48 AM
2020-12-05-Data-Received---C.gigas-Diploid-Triploid-pH-Treatments-Ctenidia-WGBS-from-ZymoResearch/2020-12-05-Data-Received---C.gigas-Diploid-Triploid-pH-Treatments-Ctenidia-WGBS-from-ZymoResearch/ - Oct 01 2023 12:03:47 AM
2020-12-06-FastQC-MultiQc---C.gigas-Ploidy-pH-WGBS-Raw-Sequence-Data-from-Haws-Lab-on-Mox/2020-12-06-FastQC-MultiQc---C.gigas-Ploidy-pH-WGBS-Raw-Sequence-Data-from-Haws-Lab-on-Mox/ - Oct 01 2023 12:03:46 AM
2020-12-06-Trimming---Haws-Lab-C.gigas-Ploidy-pH-WGBS-10bp-5-and-3-Prime-Ends-Using-fastp-and-MultiQC-on-Mox/2020-12-06-Trimming---Haws-Lab-C.gigas-Ploidy-pH-WGBS-10bp-5-and-3-Prime-Ends-Using-fastp-and-MultiQC-on-Mox/ - Oct 01 2023 12:03:45 AM
2020-12-07-SRA-Submission---Haws-Lab-C.gigas-Ploidy-pH-WGBS/2020-12-07-SRA-Submission---Haws-Lab-C.gigas-Ploidy-pH-WGBS/ - Oct 01 2023 12:03:44 AM
2020-12-08-Alignment---C.gigas-RNAseq-to-GCF_000297895.1_oyster_v9-Genome-Using-STAR-on-Mox/2020-12-08-Alignment---C.gigas-RNAseq-to-GCF_000297895.1_oyster_v9-Genome-Using-STAR-on-Mox/ - Oct 01 2023 12:03:42 AM
2020-12-11-Data-Received---M.magister-MBD-BSseq-Pool-Test-MiSeq-Run/2020-12-11-Data-Received---M.magister-MBD-BSseq-Pool-Test-MiSeq-Run/ - Oct 01 2023 12:03:41 AM
2020-12-11-FastQC-MultiQC---M.magister-MBD-BSseq-Pool-Test-MiSeq-Run-on-Mox/2020-12-11-FastQC-MultiQC---M.magister-MBD-BSseq-Pool-Test-MiSeq-Run-on-Mox/ - Oct 01 2023 12:03:40 AM
2020-12-17-Samples-Received---Cockle-Clam-Gonad-H-and-E-Slides/2020-12-17-Samples-Received---Cockle-Clam-Gonad-H-and-E-Slides/ - Oct 01 2023 12:03:39 AM
2020-12-24-Alignments---C.bairdi-RNAseq-Transcriptome-Alignments-Using-Bowtie2-on-Mox/2020-12-24-Alignments---C.bairdi-RNAseq-Transcriptome-Alignments-Using-Bowtie2-on-Mox/ - Oct 01 2023 12:03:38 AM
2020-12-29-Transcriptome-Comparisons---C.bairdi-Transcriptomes-Evaluations-with-DETONATE-rsem-eval-on-Mox/2020-12-29-Transcriptome-Comparisons---C.bairdi-Transcriptomes-Evaluations-with-DETONATE-rsem-eval-on-Mox/ - Oct 01 2023 12:03:38 AM
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