Jupyter (IPython) Notebook: 20150414_C_virginica_LSU_Oil_Spill_Trimmomatic_FASTQC.ipynb

NBviewer: 20150414_C_virginica_LSU_Oil_Spill_Trimmomatic_FASTQC.ipynb

Trimmed FASTQC

NB3 No oil Index - ACAGTG

20150414_trimmed_2112_lane1_ACAGTG_L001_R1_001_fastqc.html 20150414_trimmed_2112_lane1_ACAGTG_L001_R1_002_fastqc.html

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NB6 No oil Index - GCCAAT

20150414_trimmed_2112_lane1_GCCAAT_L001_R1_001_fastqc.html 20150414_trimmed_2112_lane1_GCCAAT_L001_R1_002_fastqc.html

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NB11 No oil Index - CAGATC

20150414_trimmed_2112_lane1_CAGATC_L001_R1_001_fastqc.html 20150414_trimmed_2112_lane1_CAGATC_L001_R1_002_fastqc.html 20150414_trimmed_2112_lane1_CAGATC_L001_R1_003_fastqc.html

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HB2 25,000ppm oil Index - ATCACG

20150414_trimmed_2112_lane1_ATCACG_L001_R1_001_fastqc.html 20150414_trimmed_2112_lane1_ATCACG_L001_R1_002_fastqc.html 20150414_trimmed_2112_lane1_ATCACG_L001_R1_003_fastqc.html

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HB16 25,000ppm oil Index - TTAGGC

20150414_trimmed_2112_lane1_TTAGGC_L001_R1_001_fastqc.html 20150414_trimmed_2112_lane1_TTAGGC_L001_R1_002_fastqc.html

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HB30 25,000ppm oil Index - TGACCA

20150414_trimmed_2112_lane1_TGACCA_L001_R1_001_fastqc.html