Data Management – Geoduck RRBS Data Integrity Verification

Yesterday, I downloaded the Illumina FASTQ files provided by Genewiz for Hollie Putnam’s reduced representation bisulfite geoduck libraries. However, Genewiz had not provided a checksum file at the time.

I received the checksum file from Genewiz and have verified that the data is intact. Verification is described in the Jupyter notebook below.

Data files are located here: owl/web/nightingales/P_generosa

Jupyter notebook (GitHub): 20161230_docker_geoduck_RRBS_md5_checks.ipynb

One comment

Leave a Reply

Your email address will not be published. Required fields are marked *


e.g. 0000-0002-7299-680X

You may use these HTML tags and attributes: <a href="" title=""> <abbr title=""> <acronym title=""> <b> <blockquote cite=""> <cite> <code> <del datetime=""> <em> <i> <q cite=""> <strike> <strong>