Sam's Notebook

University of Washington – Fishery Sciences – Roberts Lab

Menu

  • Old Notebook 2008
  • Free bioinformatics tools
  • About Me

Tag Archives: SAMN10172237

SRA Submission – Olymia oyster Whole Genome BS-seq Data

0000-0002-2747-368X

Submitted our whole genome bisulfite sequencing data to NCBI Sequence Read Archive (SRA).

Relevant SRA info is below.

Have updated nightingales Google Sheet with SRA info.

SAMPLE SRA (Study) BioProject BioSample
1NF11 SRP163248 PRJNA494552 SAMN10172233
1NF15 SRP163248 PRJNA494552 SAMN10172234
1NF16 SRP163248 PRJNA494552 SAMN10172235
1NF17 SRP163248 PRJNA494552 SAMN10172236
2NF5 SRP163248 PRJNA494552 SAMN10172237
2NF6 SRP163248 PRJNA494552 SAMN10172238
2NF7 SRP163248 PRJNA494552 SAMN10172239
2NF8 SRP163248 PRJNA494552 SAMN10172240
Posted in Olympia oyster reciprocal transplant and tagged 1NF11, 1NF15, 1NF16, 1NF17, 2NF5, 2NF6, 2NF7, 2NF8, BS-seq, Fidalgo Bay, olympia oyster, Ostrea lurida, Oyster Bay, PRJNA494552, SAMN10172233, SAMN10172234, SAMN10172235, SAMN10172236, SAMN10172237, SAMN10172238, SAMN10172239, SAMN10172240, SRA, SRP163248 on October 3, 2018 by kubu4. Leave a comment
Loading

Projects

Links

  • GitHub – Roberts Lab Repository
    • GitHub – Roberts Lab Wiki
    • GitHub – Roberts Lab Notebooks
  • GitHub – My Repository
  • I Try Linux

Recent Posts

  • New Notebook November 8, 2018
  • qPCRs – Ronit’s C.gigas ploidy/dessication/heat stress cDNA (1:5 dilution) October 18, 2018
  • Samples Received – Crassostrea virginica (Eastern oyster) tissue from Lotterhos Lab (Northeastern University) October 17, 2018
  • Reverse Transcription – Ronit’s C.gigas DNased ctenidia RNA October 17, 2018
  • qPCR – Ronit’s DNAsed C.gigas Ploidy/Dessication RNA with elongation factor primers October 17, 2018

Tag Cloud

BB black abalone BS-seq cDNA COX Crassostrea gigas Crassostrea virginica cyclooxygenase DNA Isolation DNA Quantification DNase DNased RNA Eastern oyster EtOH precipitation gDNA gel geoduck gill gonad Haliotis cracherodii Hard clam hemocyte Immomix jupyter notebook library prep Mercenaria mercenaria NanoDrop1000 olympia oyster Opticon2 Ostrea lurida Pacific herring Pacific oyster Panopea generosa PCR PGS prostaglandin synthase qPCR RNA RNA isolation RNA quantification SOLiD SOLiD libraries SYTO13 Turbo DNA-free Vibrio tubiashii

Archives

Meta

  • Register
  • Log in
  • Entries RSS
  • Comments RSS
  • Open Notebook Science Network
Proudly powered by WordPress · Theme: Suits by Theme Weaver