We received Grace’s 100bp PE NovaSeq (Illumian) RNAseq data from the Northwest Genomics Center today.

Data was downloaded via their Aspera browser plugin and rsynced to:

• Owl/nightingales/C_bairdi

MD5 checksums were generated (md5sum on Ubuntu):

• checksums.md5

321ec408ba7e0f0be1929ca44871f963  304428_S1_L001_R1_001.fastq.gz
b95c69f755c9c42d9203429119d4234d  304428_S1_L001_R2_001.fastq.gz
a0fd8db312057dedd480231d4d125fd3  304428_S1_L002_R1_001.fastq.gz
c6e70ef7f3c8a866851a1b9453aef36a  304428_S1_L002_R2_001.fastq.gz

FastQC analysis was run, followed by MultiQC.

Output folder (gannet/Atumefaciens):

• 20181015_Cbairdi_fastqc/

MultiQC Report (HTML):

• 20181015_Cbairdi_fastqc/multiqc_report.html

Nightingales spreadsheet was updated with file info and FastQC info:

• Nightingales (Google Sheet)